RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 REEP6Q96HR9 211 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 TEAD3Q99594 435 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 ATG101Q9BSB4 218 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 GABARAPL1Q9H0R8 117 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 FN3KRPQ9HA64 309 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 PATZ1Q9HBE1 687 aaKnown RBP4.35□□□□□ -1.71
CCDC93-203ENST00000437999 CHMP1AQ9HD42 196 aaPredicted RBP4.35□□□□□ -1.71
CCDC93-203ENST00000437999 DNAJC27Q9NZQ0 273 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 ZNF319Q9P2F9 582 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 ONECUT1Q9UBC0 465 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 KLHDC2Q9Y2U9 406 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 WNK2Q9Y3S1 2297 aa4.35□□□□□ -1.71
CCDC93-203ENST00000437999 DOCK11Q5JSL3 2073 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 hCG_38984A0A1B0GV85 526 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 BTBD17A6NE02 478 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 CEACAM18A8MTB9 384 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 PSMD9O00233 223 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 PHF1O43189 567 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 XRCC2O43543 280 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 GMDSO60547 372 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 FOXH1O75593 365 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 IL6RP08887 468 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 MRPL3P09001 348 aaKnown RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 WNT2P09544 360 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 VPREB1P12018 145 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 IRF2P14316 349 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 ALOX5APP20292 161 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 POLR2IP36954 125 aaKnown RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 DDOSTP39656 456 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 MDH2P40926 338 aaKnown RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 COMPP49747 757 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 SEC61A1P61619 476 aaKnown RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 HOXA4Q00056 320 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 ZNF181Q2M3W8 571 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 FAM201AQ5SY85 155 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 SLX4IPQ5VYV7 408 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 C12orf73Q69YU5 71 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 LRRN1Q6UXK5 716 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 SIGLEC15Q6ZMC9 328 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 SPICQ8N5J4 248 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 TCEANCQ8N8B7 351 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 C19orf18Q8NEA5 215 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 OR52H1Q8NGJ2 320 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 ERGIC1Q969X5 290 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 CENPNQ96H22 339 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 IL4I1Q96RQ9 567 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 CIB1Q99828 191 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 ADAT1Q9BUB4 502 aaKnown RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 OSBPL10Q9BXB5 764 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 PRRG3Q9BZD7 231 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 YIPF3Q9GZM5 350 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 FAM192AQ9GZU8 254 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 SLC22A4Q9H015 551 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 METTL17Q9H7H0 456 aaPredicted RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 PPP1R3EQ9H7J1 279 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 SP140LQ9H930 580 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 TMEM165Q9HC07 324 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 MMP26Q9NRE1 261 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 UFSP2Q9NUQ7 469 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 COPS3Q9UNS2 423 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 NOP16Q9Y3C1 178 aaKnown RBP4.34□□□□□ -1.71
CCDC93-203ENST00000437999 LRP12Q9Y561 859 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 A3GALT2U3KPV4 340 aa4.34□□□□□ -1.71
CCDC93-203ENST00000437999 MXRA5Q9NR99 2828 aa4.34□□□□□ -1.72
CCDC93-203ENST00000437999 A0A075B6Q4 140 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PPIAL4EA0A075B759 164 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 LOC105371242A0A075B767 164 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 A0A087X0K7 114 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 A0A0G2JMP0 313 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 A0A0X1KG70 313 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 TMEM269A0A1B0GVZ9 245 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 LRRC30A6NM36 301 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 ANKRD30BLA7E2S9 258 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 RNF212BA8MTL3 300 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PRR32B1ATL7 298 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PPIAL4DF5H284 164 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 H3BNX3 289 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 TRAPPC2LH3BP13 241 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 J3QLI3 93 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 FSTL3O95633 263 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 CRYGCP07315 174 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PPIAL4FP0DN26 164 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 CFL1P23528 166 aaKnown RBP4.33□□□□□ -1.72
CCDC93-203ENST00000437999 MTCP1P56278 107 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PNLIPRP3Q17RR3 467 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 ZNF404Q494X3 552 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PDLIM3Q53GG5 364 aaPredicted RBP4.33□□□□□ -1.72
CCDC93-203ENST00000437999 LCN1P1Q5VSP4 162 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 NXNL2Q5VZ03 156 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 KCTD18Q6PI47 426 aaPredicted RBP4.33□□□□□ -1.72
CCDC93-203ENST00000437999 DEGS2Q6QHC5 323 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 LYPD2Q6UXB3 125 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 PQLC2Q6ZP29 291 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 ZNF826PQ6ZT77 177 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 WDR86Q86TI4 376 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 KLBQ86Z14 1044 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
CCDC93-203ENST00000437999 MUC20Q8N307 709 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms