RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR14L1PQ8NHC6 308 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 LRP5LA4QPB2 252 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 HIDE1A8MVS5 230 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 H0YGG7 62 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 ST8SIA3O43173 380 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CHRM2P08172 466 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 SCGB1C2P0DMR2 95 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 FSTP19883 344 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DCAF7P61962 342 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 OR9A4Q8NGU2 314 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 C8orf44Q96CB5 159 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PCGF1Q9BSM1 259 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 HINT2Q9BX68 163 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 LPAR2Q9HBW0 351 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 KIAA1456Q9P272 454 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 MRPS18CQ9Y3D5 142 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 DIDO1Q9BTC0 2240 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CDC14CA4D256 554 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 GCGP01275 180 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 ASAH2BP0C7U1 165 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 P2RY2P41231 377 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 MRPS34P82930 218 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 EWSR1Q01844 656 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 GNMTQ14749 295 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PLCXD3Q63HM9 321 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 KIAA0895LQ68EN5 471 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 WBP2NLQ6ICG8 309 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CPEB3Q8NE35 698 aaKnown RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 COX14Q96I36 57 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 GPHA2Q96T91 129 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF665Q9H7R5 613 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 G6PC2Q9NQR9 355 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 FOXJ2Q9P0K8 574 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 V9GYS6 101 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 A0A1W2PR80 420 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 PPP5D1E7EU14 171 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 H3BP45 60 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 HPRT1P00492 218 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 BGLAPP02818 100 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 METTL15P1P0C7V9 234 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 TMEM225BP0DP42 221 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 HLA-DOBP13765 273 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 GABRR1P24046 479 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 RTP5Q14D33 572 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 THEM4Q5T1C6 240 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 FDX2Q6P4F2 183 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 ABHD12BQ7Z5M8 362 aaPredicted RBP6.55□□□□□ -1.36
CPSF6-202ENST00000435070 OR5D14Q8NGL3 314 aa6.55□□□□□ -1.36
CPSF6-202ENST00000435070 CTSBP07858 339 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 SCGB1A1P11684 91 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CFPP27918 469 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CD1BP29016 333 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 RPS15AP62244 130 aaKnown RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 TOMM20LQ6UXN7 152 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 ATG4DQ86TL0 474 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 RHBDD1Q8TEB9 315 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 RNF186Q9NXI6 227 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 B4E171 279 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CDC14BO60729 498 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 RAC2P15153 192 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 PLA2G5P39877 138 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 QRFPP83859 136 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 SLC16A14Q7RTX9 510 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 C6orf201Q7Z4U5 140 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 BCORP1Q8N888 145 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 OR5C1Q8NGR4 320 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 OR2A5Q96R48 311 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 ARV1Q9H2C2 271 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CALHM2Q9HA72 323 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 ARHGEF17Q96PE2 2063 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 LRRK1Q38SD2 2015 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CEBPZOSA8MTT3 80 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CD82P27701 267 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 C1QL2Q7Z5L3 287 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 SLC35E3Q7Z769 313 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 LHFPL1Q86WI0 220 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CALHM1Q8IU99 346 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF440Q8IYI8 595 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 OR11L1Q8NGX0 322 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 CCL4L1Q8NHW4 92 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 RTN4IP1Q8WWV3 396 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 PTX4Q96A99 478 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 PARD6AQ9NPB6 346 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 H0YIG0 161 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 FIGLAQ6QHK4 219 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 Q6ZVH6 145 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 DDIT4LQ96D03 193 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 C2orf72A6NCS6 295 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 SSSCA1O60232 199 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 GSTP1P09211 210 aaKnown RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 SUCLG1P53597 346 aaKnown RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 RSPO4Q2I0M5 234 aaPredicted RBP6.54□□□□□ -1.36
CPSF6-202ENST00000435070 FAM57BQ71RH2 274 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
CPSF6-202ENST00000435070 MYPOPQ86VE0 399 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms