RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 NINJ1Q92982 152 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 MUCL1Q96DR8 90 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 OPN3Q9H1Y3 402 aaPredicted RBP10.49□□□□□ -0.73
CLDN4-203ENST00000435050 MSL2Q9HCI7 577 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
CLDN4-203ENST00000435050 MPTX1A8MV57 137 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 BMP5P22003 454 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 TMEM268Q5VZI3 342 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 FAM58AQ8N1B3 248 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 TMEM45BQ96B21 275 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 EDARQ9UNE0 448 aa10.49□□□□□ -0.73
CLDN4-203ENST00000435050 MRPS18CQ9Y3D5 142 aaKnown RBP10.49□□□□□ -0.73
CLDN4-203ENST00000435050 OR2A4O95047 310 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 CRYZL1O95825 349 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 OTX1P32242 354 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 UBA52P62987 128 aaKnown RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 FAM214BQ7L5A3 538 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 DPPA2Q7Z7J5 298 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 GMPPAQ96IJ6 420 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 OR2A7Q96R45 310 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 MAGT1Q9H0U3 335 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 HRH4Q9H3N8 390 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF724A8MTY0 619 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 WDR1O75083 606 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 MMP7P09237 267 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 TPT1P13693 172 aaKnown RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF250P15622 560 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 AADACP22760 399 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 CD82P27701 267 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ASCL1P50553 236 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 HNF4GQ14541 408 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 MPPED2Q15777 294 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ANKRD55Q3KP44 614 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 TOR2AQ5JU69 321 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 VAX1Q5SQQ9 334 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 MDS2Q8NDY4 140 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF175Q9Y473 711 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF503-AS2A6NEH8 195 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 WT1P19544 449 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 IL2RGP31785 369 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF616Q08AN1 781 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 C1orf147Q96MC9 270 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-203ENST00000435050 PRDM14Q9GZV8 571 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 SDHAF2Q9NX18 166 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 KCNIP1Q9NZI2 227 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 SHANK1Q9Y566 2161 aa10.48□□□□□ -0.73
CLDN4-203ENST00000435050 RBM39Q14498 530 aaKnown RBP10.47□□□□□ -0.73
CLDN4-203ENST00000435050 MRPL24Q96A35 216 aaKnown RBP10.47□□□□□ -0.73
CLDN4-203ENST00000435050 C2orf50Q96LR7 162 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 SPRY4Q9C004 299 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 PPP1R3CQ9UQK1 317 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF705EA8MWA4 302 aaPredicted RBP10.47□□□□□ -0.73
CLDN4-203ENST00000435050 OR2F2O95006 317 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 CRHP06850 196 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 PVALBP20472 110 aaPredicted RBP10.47□□□□□ -0.73
CLDN4-203ENST00000435050 CHATP28329 748 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 OR2F1Q13607 317 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 AADACL3Q5VUY0 350 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 CCDC36Q8IYA8 594 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 RBPMSQ93062 196 aaKnown RBP10.47□□□□□ -0.73
CLDN4-203ENST00000435050 LINC00470Q9BZP3 86 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 TUSC2O75896 110 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 CLINT1Q14677 625 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF826PQ6ZT77 177 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 OR10J5Q8NHC4 309 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 GLS2Q9UI32 602 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 CEP295Q9C0D2 2601 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 LEUTXA8MZ59 168 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 LILRA1O75019 489 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 RHBDL1O75783 438 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 WISP2O76076 250 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 SCTP09683 121 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 SELENOVP59797 346 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 HIST1H3AP68431 136 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 LY6G6FQ5SQ64 297 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 HIST2H3PS2Q5TEC6 136 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 GGNBP1Q5YKI7 109 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 BEND4Q6ZU67 534 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 HIST2H3AQ71DI3 136 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 OVCH2Q7RTZ1 564 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 LGI3Q8N145 548 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 DEFB108BQ8NET1 73 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 C1QTNF5Q9BXJ0 243 aa10.47□□□□□ -0.73
CLDN4-203ENST00000435050 DIDO1Q9BTC0 2240 aaKnown RBP10.46□□□□□ -0.73
CLDN4-203ENST00000435050 F8VVB4 439 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 F8VWA3 439 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 SNAPC5O75971 98 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 CEACAM21Q3KPI0 293 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 TMEM217Q8N7C4 229 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF610Q8N9Z0 462 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 TECTBQ96PL2 329 aa10.46□□□□□ -0.73
CLDN4-203ENST00000435050 KIR2DS1A0A191URI9 304 aa10.46□□□□□ -0.74
CLDN4-203ENST00000435050 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.74
CLDN4-203ENST00000435050 PTGER4P35408 488 aa10.46□□□□□ -0.74
CLDN4-203ENST00000435050 KIR2DS4P43632 304 aa10.46□□□□□ -0.74
CLDN4-203ENST00000435050 CEBPDP49716 269 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms