RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 MFSD14CQ5VZR4 134 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ELP2Q6IA86 826 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 NANOGP8Q6NSW7 305 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 UGT2A3Q6UWM9 527 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 DGAT2L6Q6ZPD8 337 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TPGS1Q6ZTW0 290 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 FAM19A3Q7Z5A8 133 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 LINC00596Q86U02 117 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 SPATA24Q86W54 205 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF101Q8IZC7 436 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 SLC25A29Q8N8R3 303 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 OR51Q1Q8NH59 317 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF461Q8TAF7 563 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 UBA3Q8TBC4 463 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TWIST2Q8WVJ9 160 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ESR2Q92731 530 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 RBPMSQ93062 196 aaKnown RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 LRRC45Q96CN5 670 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 SNF8Q96H20 258 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 RNF157Q96PX1 679 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 GPR22Q99680 433 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 RNF5Q99942 180 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TBL1YQ9BQ87 522 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF251Q9BRH9 671 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TSSK6Q9BXA6 273 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TBL1XR1Q9BZK7 514 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 NSRP1Q9H0G5 558 aaKnown RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 DHX35Q9H5Z1 703 aaKnown RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 PLEKHF2Q9H8W4 249 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 EXOSC4Q9NPD3 245 aaKnown RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 IMP3Q9NV31 184 aaKnown RBP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 C1orf109Q9NX04 203 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 NAGKQ9UJ70 344 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 RAB22AQ9UL26 194 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 FADS3Q9Y5Q0 445 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 PUS1Q9Y606 427 aaKnown RBP eCLIP1.6□□□□□ -2.15
PTPN4-205ENST00000433888 TMEM14AQ9Y6G1 99 aa1.6□□□□□ -2.15
PTPN4-205ENST00000433888 IGLV2-18A0A075B6J9 118 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 GOLGA6L10A6NI86 522 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 CEACAM18A8MTB9 384 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 BTNL10A8MVZ5 291 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 C8orf87E5RJ46 101 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 CLDN34H7C241 214 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 GPR171O14626 319 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 ITGB1BP1O14713 200 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 TAAR5O14804 337 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 FFAR1O14842 300 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 PLIN3O60664 434 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 GATBO75879 557 aaKnown RBP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 RAB36O95755 333 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 CCNE2O96020 404 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 RPA3P35244 121 aaPredicted RBP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 CXCL12P48061 93 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 GCLMP48507 274 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 SULT1A2P50226 295 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 BLVRAP53004 296 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 RAB8AP61006 207 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 SSX1Q16384 188 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 Q499Y3 187 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 UBE2NLQ5JXB2 153 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 RBM48Q5RL73 367 aaKnown RBP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 MED27Q6P2C8 311 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 GUSBP11Q6P575 273 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 SLC25A34Q6PIV7 304 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 FAM131AQ6UXB0 335 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 FA2HQ7L5A8 372 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 MNS1Q8NEH6 495 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 FAM57AQ8TBR7 257 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 DYNC2LI1Q8TCX1 351 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 EXOSC8Q96B26 276 aaKnown RBP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 ARL5BQ96KC2 179 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF649Q9BS31 505 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 FAAP24Q9BTP7 215 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 MS4A8Q9BY19 250 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 PARD6GQ9BYG4 376 aaPredicted RBP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 OR51E2Q9H255 320 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 RBM22Q9NW64 420 aaKnown RBP eCLIP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF230Q9UIE0 474 aaPredicted RBP1.59□□□□□ -2.15
PTPN4-205ENST00000433888 RWDD2AQ9UIY3 292 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF780BQ9Y6R6 833 aa1.59□□□□□ -2.15
PTPN4-205ENST00000433888 CARMIL3Q8ND23 1372 aa1.59□□□□□ -2.16
PTPN4-205ENST00000433888 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 A0A1W2PRG6 482 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 TMEM72A0PK05 275 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 OR2AT4A6NND4 320 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 COLCA2A8K830 154 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 C9J4A7 227 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 GOLGA8KD6RF30 607 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 GOLGA8MH3BSY2 632 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 TCAPO15273 167 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 TOX3O15405 576 aaPredicted RBP1.58□□□□□ -2.16
PTPN4-205ENST00000433888 NIPSNAP2O75323 286 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 KLHL2O95198 593 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 CXorf1O96002 111 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 CYB5R3P00387 301 aaPredicted RBP1.58□□□□□ -2.16
PTPN4-205ENST00000433888 CD74P04233 296 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 IGKV4-1P06312 121 aa1.58□□□□□ -2.16
PTPN4-205ENST00000433888 MRPL3P09001 348 aaKnown RBP1.58□□□□□ -2.16
PTPN4-205ENST00000433888 OCMP0CE72 109 aaPredicted RBP1.58□□□□□ -2.16
PTPN4-205ENST00000433888 C1GALT1C1LP0DN25 315 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms