RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 SOX7Q9BT81 388 aa12.84□□□□□ -0.35
DDX56-205ENST00000433257 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
DDX56-205ENST00000433257 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
DDX56-205ENST00000433257 RCL1Q9Y2P8 373 aaKnown RBP12.84□□□□□ -0.35
DDX56-205ENST00000433257 ZNF732B4DXR9 585 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 NPIPA2E9PIF3 369 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 F5H5K5 113 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 NPIPA3F8WFD2 350 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 DHHO43323 396 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 HTR5AP47898 357 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.35
DDX56-205ENST00000433257 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.35
DDX56-205ENST00000433257 KIAA0141Q14154 515 aaPredicted RBP12.83□□□□□ -0.35
DDX56-205ENST00000433257 ENDOGQ14249 297 aaKnown RBP12.83□□□□□ -0.35
DDX56-205ENST00000433257 CPEB2Q7Z5Q1 589 aaKnown RBP12.83□□□□□ -0.35
DDX56-205ENST00000433257 FAM213BQ8TBF2 198 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 TOMM40LQ969M1 308 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 SPACA9Q96E40 222 aaPredicted RBP12.83□□□□□ -0.35
DDX56-205ENST00000433257 BORCS8Q96FH0 119 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 YPEL4Q96NS1 127 aa12.83□□□□□ -0.35
DDX56-205ENST00000433257 PAPOLGQ9BWT3 736 aaKnown RBP12.83□□□□□ -0.35
DDX56-205ENST00000433257 ASCC3Q8N3C0 2202 aaKnown RBP12.83□□□□□ -0.36
DDX56-205ENST00000433257 TRAV20A0A0B4J274 112 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 GJE1A6NN92 205 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 SEC14L6B5MCN3 397 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 MASP2O00187 686 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 DIRAS3O95661 229 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 NQO2P16083 231 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 ID4P47928 161 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 NOVA1P51513 510 aaKnown RBP12.83□□□□□ -0.36
DDX56-205ENST00000433257 VAMP2P63027 116 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
DDX56-205ENST00000433257 MALLQ13021 153 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 TMEM176BQ3YBM2 270 aaPredicted RBP12.83□□□□□ -0.36
DDX56-205ENST00000433257 NKAIN1Q4KMZ8 207 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 PIGTQ969N2 578 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 MUCL1Q96DR8 90 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 PARPBPQ9NWS1 579 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 GAR1Q9NY12 217 aaKnown RBP12.83□□□□□ -0.36
DDX56-205ENST00000433257 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 SLC7A11Q9UPY5 501 aa12.83□□□□□ -0.36
DDX56-205ENST00000433257 DMXL1Q9Y485 3027 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 IGKV1D-8A0A087WSZ0 117 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 hCG_1809904A0A1W2PP81 198 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 A0A1W2PR64 198 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 A0A1W2PRV1 198 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 TRDCB7Z8K6 153 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 CBR1P16152 277 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 FUT6P51993 359 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 RPS23P62266 143 aaKnown RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 H3F3AP84243 136 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 FOXO1Q12778 655 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 ZNF506Q5JVG8 444 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 TMEM182Q6ZP80 229 aaPredicted RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 OSR2Q8N2R0 312 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 CLEC18CQ8NCF0 446 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 OR2G3Q8NGZ4 309 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 LIN37Q96GY3 246 aaPredicted RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 SF3B5Q9BWJ5 86 aaKnown RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 LYRM2Q9NU23 88 aaPredicted RBP12.82□□□□□ -0.36
DDX56-205ENST00000433257 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 TINAGQ9UJW2 476 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 FBXO7Q9Y3I1 522 aa12.82□□□□□ -0.36
DDX56-205ENST00000433257 A0A1W2PNR3 127 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 PHF1O43189 567 aaPredicted RBP12.81□□□□□ -0.36
DDX56-205ENST00000433257 TXNL1O43396 289 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 PPIHO43447 177 aaKnown RBP12.81□□□□□ -0.36
DDX56-205ENST00000433257 PDCD6O75340 191 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 DFFBO76075 338 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 CST2P09228 141 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 PNLIPP16233 465 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 S100GP29377 79 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 AKR1C3P42330 323 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 EXT1Q16394 746 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 KHDC3LQ587J8 217 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 FAM69BQ5VUD6 431 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 SLC22A25Q6T423 547 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 ETV3LQ6ZN32 361 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 ALPK2Q86TB3 2170 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 FBXL14Q8N1E6 418 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 ZNF610Q8N9Z0 462 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 HSD17B11Q8NBQ5 300 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 NPRL2Q8WTW4 380 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 ISOC2Q96AB3 205 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 NABP1Q96AH0 204 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 NIPSNAP3BQ9BS92 247 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms