RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 C20orf173Q96LM9 149 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 SEC61A2Q9H9S3 476 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MARCH2Q9P0N8 246 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 NOP16Q9Y3C1 178 aaKnown RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 ATRXP46100 2492 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 METP08581 1390 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 POLEQ07864 2286 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 PPIFP30405 207 aaKnown RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 CRISP3P54108 245 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 TPPP2P59282 170 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM174Q8WUU8 243 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 LINC01599Q8WXQ3 324 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MGLLQ99685 303 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MESP1Q9BRJ9 268 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 TIMM10BQ9Y5J6 103 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MED13Q9UHV7 2174 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 N4BP2Q86UW6 1770 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 CAMSAP1Q5T5Y3 1602 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 SYCP2Q9BX26 1530 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 MUC21A0A0G2JKD1 596 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 A0A1W2PPI3 338 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 TCRBV7S3A2A0A539 114 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 IFITM10A6NMD0 228 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GSTZ1O43708 216 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 CXCL10P02778 98 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GPR6P46095 362 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF140P52738 457 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 RPL31P62899 125 aaKnown RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 RPL8P62917 257 aaKnown RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GAGE2BQ13066 116 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GAGE2EQ4V326 116 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 SAXO1Q8IYX7 474 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GPR135Q8IZ08 494 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GPR26Q8NDV2 337 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 IRF7Q92985 503 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 NPFFR1Q9GZQ6 430 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 FGF20Q9NP95 211 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 NTMQ9P121 344 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 GAGE2DQ9UEU5 116 aa4.69□□□□□ -1.66
PTPN4-203ENST00000430976 BOKQ9UMX3 212 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-203ENST00000430976 LOC102725191A0A1B0GVB3 256 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TEX22C9J3V5 150 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 WNT10BO00744 389 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 GRAP2O75791 330 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 HKR1P10072 659 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 RRADP55042 308 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ERVK11-1P61568 191 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TIGITQ495A1 244 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 UBE2NLQ5JXB2 153 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ASTLQ6HA08 431 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SCD5Q86SK9 330 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 MARCH9Q86YJ5 346 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 IGDCC3Q8IVU1 814 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PRR22Q8IZ63 422 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SUMF2Q8NBJ7 301 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 OR6K2Q8NGY2 324 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PPTC7Q8NI37 304 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TMED6Q8WW62 240 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 EID2BQ96D98 161 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PIPOXQ9P0Z9 390 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 CD207Q9UJ71 328 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 OTOFQ9HC10 1997 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SCN10AQ9Y5Y9 1956 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TEX48A0A1B0GUV7 120 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 A0A1W2PRF3 423 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 A0A1W2PRM7 423 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 IDSB3KWA1 339 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NME4O00746 187 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 CREBL2O60519 120 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 KLF7O75840 302 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 MT-CO3P00414 261 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 CHRM4P08173 479 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ADRA2AP08913 450 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SRPXP78539 464 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 MLF2Q15773 248 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 RBMXL3Q8N7X1 1067 aaKnown RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 OR4A5Q8NH83 315 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NAT6Q93015 286 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 S100A16Q96FQ6 103 aaKnown RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 GPR82Q96P67 336 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 GABRG3Q99928 467 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 C1QTNF5Q9BXJ0 243 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NKX2-4Q9H2Z4 354 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 POMKQ9H5K3 350 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 U3KQE9 123 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TRAV36DV7A0A075B6V5 113 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 GRIFINA4D1Z8 144 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 HYAL3O43820 417 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 LSM8O95777 96 aaKnown RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NUDT14O95848 222 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TOMM40O96008 361 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 HPXP02790 462 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PSG9Q00887 426 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 MEF2CQ06413 473 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF816Q0VGE8 651 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TXNRD3NBQ6F5E7 133 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PRSS54Q6PEW0 395 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SLC25A47Q6Q0C1 308 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms