RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TMEM106AQ96A25 262 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 RSRC1Q96IZ7 334 aaKnown RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 EAF1Q96JC9 268 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 SNX22Q96L94 193 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 PRRC1Q96M27 445 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 C18orf15Q96N68 181 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 S1PR3Q99500 378 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 PAIP2Q9BPZ3 127 aaKnown RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 IFT27Q9BW83 186 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FGF23Q9GZV9 251 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 MFFQ9GZY8 342 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 SDR39U1Q9NRG7 319 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 TPSG1Q9NRR2 321 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 KRT84Q9NSB2 600 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 MBNL3Q9NUK0 354 aaKnown RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 COMMD3-BMI1R4GMX3 469 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 A3GALT2U3KPV4 340 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 PKHD1P08F94 4074 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 LOC102724200A0A096LPH7 203 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 A0A1W2PPI3 338 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 FUOMA2VDF0 154 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 LY6LH3BQJ8 138 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 HSD17B6O14756 317 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 RTL8CO15255 209 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 TYROBPO43914 113 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 CD7P09564 240 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 H2BFMP0C1H6 154 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 H2AFXP16104 143 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 ZP3P21754 424 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 ACKR3P25106 362 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 SLC18A1P54219 525 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 SNU13P55769 128 aaKnown RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 P2RX3P56373 397 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 TCTAP57738 103 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 FHL1Q13642 323 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 TATDN3Q17R31 274 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 DEFB135Q30KP9 77 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 LRRC23Q53EV4 343 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 KLHL12Q53G59 568 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 PAGE3Q5JUK9 113 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 TBPL2Q6SJ96 375 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 MBOAT2Q6ZWT7 520 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 ASRGL1Q7L266 308 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 SLC16A13Q7RTY0 426 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 RNF113BQ8IZP6 322 aaKnown RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 CENPSQ8N2Z9 138 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 Q8N9W7 124 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 DNAAF1Q8NEP3 725 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 OR51L1Q8NGJ5 315 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 OR9G4Q8NGQ1 327 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 OR52J3Q8NH60 311 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 FANK1Q8TC84 345 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 MYOZ3Q8TDC0 251 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 HAVCR2Q8TDQ0 301 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 TSPEARQ8WU66 669 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 LEAP2Q969E1 77 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 SPDL1Q96EA4 605 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 MS4A10Q96PG2 267 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 C20orf27Q9GZN8 174 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 MRPL22Q9NWU5 206 aaKnown RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 CCDC167Q9P0B6 97 aa4.78□□□□□ -1.64
SDCBP-203ENST00000424270 MRM2Q9UI43 246 aaKnown RBP4.78□□□□□ -1.64
SDCBP-203ENST00000424270 DYNC1H1Q14204 4646 aaKnown RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 TMEM82A0PJX8 343 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 ANKRD34BA5PLL1 514 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 IZUMO1RA6ND01 250 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 UNC119BA6NIH7 251 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 J3QR06 171 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF593O00488 134 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 MGST3O14880 152 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 ATP6V0E1O15342 81 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF737O75373 536 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 HAND1O96004 215 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 MOSP00540 346 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 GAPDHP04406 335 aaKnown RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 HIST1H1CP16403 213 aaKnown RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 HOXB9P17482 250 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 FMO3P31513 532 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 SYNJ2BPP57105 145 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 TPPP2P59282 170 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 NANOS2P60321 138 aaKnown RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 IFFO1Q0D2I5 559 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 RAB40BQ12829 278 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 APOFQ13790 326 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 KIAA0141Q14154 515 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 DIAPH2-AS1Q14236 149 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 SLC35F1Q5T1Q4 408 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 IFT20Q8IY31 132 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 FAM156AQ8NDB6 213 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 OR6K6Q8NGW6 343 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 OR2T4Q8NH00 348 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 C11orf45Q8TAV5 145 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 FBLIM1Q8WUP2 373 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 CHAC2Q8WUX2 184 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 EMG1Q92979 244 aaKnown RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 ZBTB9Q96C00 473 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 SORT1Q99523 831 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 RANGRFQ9HD47 186 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-203ENST00000424270 SLC23A1Q9UHI7 598 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms