RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 UBE2J1Q9Y385 318 aaPredicted RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 NPTNQ9Y639 398 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 A0A0D9SG52 128 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 KANTRA0A1W2PQU2 76 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 FABP7O15540 132 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 KNG1P01042 644 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 CGAP01215 116 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 PTHLHP12272 177 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 FOXG1P55316 489 aaPredicted RBP7.19□□□□□ -1.26
USP54-203ENST00000418501 ESCO2Q56NI9 601 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 UNQ6494/PRO21346Q6UXR6 183 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 Q8NFD4 153 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 SNRNP40Q96DI7 357 aaKnown RBP7.19□□□□□ -1.26
USP54-203ENST00000418501 ELMOD3Q96FG2 381 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 SEC22CQ9BRL7 303 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 HSPB11Q9Y547 144 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 FCGR3AP08637 254 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 UCP3P55916 312 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 HGFACQ04756 655 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 FOXF2Q12947 444 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 ST3GAL2Q16842 350 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 MICBQ29980 383 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 POC1AQ8NBT0 407 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 NUP37Q8NFH4 326 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 OR2Z1Q8NG97 314 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 OR4S1Q8NGB4 309 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 OR10AD1Q8NGE0 317 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 ST6GAL2Q96JF0 529 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 IFT22Q9H7X7 185 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 RAB18Q9NP72 206 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 CACFD1Q9UGQ2 172 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 IL19Q9UHD0 177 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 SFT2D2O95562 160 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 FAM87AP0C7U9 286 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 BTCP35070 178 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 ZNF81P51508 661 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 ZNF324BQ6AW86 544 aaPredicted RBP7.19□□□□□ -1.26
USP54-203ENST00000418501 Q6ZS49 121 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
USP54-203ENST00000418501 MS4A5Q9H3V2 200 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 ASF1BQ9NVP2 202 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 DOCK10Q96BY6 2186 aa7.19□□□□□ -1.26
USP54-203ENST00000418501 IGHV1-18A0A0C4DH31 117 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 BDP1A6H8Y1 2624 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 CCL21O00585 134 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 NOS1APO75052 506 aaPredicted RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 CD200P41217 278 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 NPY4RP50391 375 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 CATR1Q13166 79 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 PLAC9Q5JTB6 97 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 ATPAF1Q5TC12 328 aaPredicted RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 VHLLQ6RSH7 139 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 SCCPDHQ8NBX0 429 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 TOMM40LQ969M1 308 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 SLC5A7Q9GZV3 580 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 OR14J1Q9UGF5 321 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 FLVCR2Q9UPI3 526 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 FAM215AQ9Y5M1 114 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 EML6Q6ZMW3 1958 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 A8MV72 311 aaPredicted RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 WRBO00258 174 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 TMEM50BP56557 158 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 TNFAIP6P98066 277 aaPredicted RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 TESK1Q15569 626 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 OR52W1Q6IF63 320 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 GLCCI1Q86VQ1 547 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 MARCH1Q8TCQ1 289 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 CA5BP1Q8WTZ4 195 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 ZNF835Q9Y2P0 537 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 PCNX3Q9H6A9 2034 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 RANBP2P49792 3224 aaKnown RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 FXYD6-FXYD2A0A087WZ82 144 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 C13orf42A0A1B0GVH6 325 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 TSC22D2O75157 780 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 RP2O75695 350 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 HAND1O96004 215 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 IGHV3-13P01766 116 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 CD40P25942 277 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 FCGR2CP31995 323 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 LUMP51884 338 aaPredicted RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 PSG7Q13046 419 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 BEX5Q5H9J7 111 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 FAAP20Q6NZ36 180 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 SUMF2Q8NBJ7 301 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 ZBTB34Q8NCN2 500 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 RNASE6Q93091 150 aaKnown RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 C1orf147Q96MC9 270 aaPredicted RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 CLCC1Q96S66 551 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 FXYD6Q9H0Q3 95 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 RNF7Q9UBF6 113 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 TINAGQ9UJW2 476 aa7.18□□□□□ -1.26
USP54-203ENST00000418501 TMA7Q9Y2S6 64 aaKnown RBP7.18□□□□□ -1.26
USP54-203ENST00000418501 GPR31O00270 319 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 HS3ST1O14792 307 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 P2RX3P56373 397 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 FXYD4P59646 89 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 IGFBP7Q16270 282 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 PIGYQ3MUY2 71 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 OVCH2Q7RTZ1 564 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms