RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GPR173Q9NS66 373 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 HCFC1P51610 2035 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A10PA6NDY2 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A18PA6NE21 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A16PA6NEW6 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A20PA6NIJ5 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A8PA6NJQ4 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A7PA6NKC0 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A22PA8MWA6 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A12PA8MX19 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A5PA8MXJ8 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A23PA8MXZ1 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 SFT2D2O95562 160 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 DBHP09172 617 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A15PP0C7V4 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A13PP0C7W8 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A14PP0C7W9 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM90A24PP0C7X0 464 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 RRASP10301 218 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 ARPC4P59998 168 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 OR8B8Q15620 311 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 SNAI3Q3KNW1 292 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 C1orf185Q5T7R7 199 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 CCDC28AQ8IWP9 274 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 SKA3Q8IX90 412 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 SAXO1Q8IYX7 474 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 KCNRGQ8N5I3 272 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 LRRC20Q8TCA0 184 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 MARCH1Q8TCQ1 289 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 NPRL2Q8WTW4 380 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 APH1AQ96BI3 265 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF845Q96IR2 970 aaPredicted RBP11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 ALKBH3Q96Q83 286 aaPredicted RBP11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 ST6GALNAC5Q9BVH7 336 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 SLC25A32Q9H2D1 315 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 CALHM2Q9HA72 323 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 EHFQ9NZC4 300 aa11.11□□□□□ -0.63
SMARCB1-203ENST00000407082 CSPG4Q6UVK1 2322 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 hCG_38984A0A1B0GV85 526 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM230AA0A1W2PPH8 454 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 C5orf51A6NDU8 294 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 SLC22A20A6NK97 555 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 OR2AT4A6NND4 320 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 MMP7P09237 267 aaPredicted RBP11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 PSMB6P28072 239 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 P2RX3P56373 397 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 TFF3Q07654 80 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 SNTB1Q13884 538 aaKnown RBP11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 C2orf68Q2NKX9 166 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 MOB3CQ70IA8 216 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 P4HA3Q7Z4N8 544 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 LHFPL1Q86WI0 220 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 PDZD9Q8IXQ8 264 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 OSR2Q8N2R0 312 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 AKR7LQ8NHP1 331 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 APOBEC3DQ96AK3 386 aaPredicted RBP11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF837Q96EG3 531 aaPredicted RBP11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 C18orf12Q96KH6 178 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 NECAP2Q9NVZ3 263 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 CLCF1Q9UBD9 225 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM215AQ9Y5M1 114 aa11.1□□□□□ -0.63
SMARCB1-203ENST00000407082 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 RPS10-NUDT3A0A1W2PQS6 291 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 DBX1A6NMT0 343 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM25EA8MYX2 175 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 SHOXO15266 292 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 PGAM2P15259 253 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 GABRR1P24046 479 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 EIF5AP63241 154 aaKnown RBP11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 ARF1P84077 181 aaKnown RBP11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 FAM3AP98173 230 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 PABPC1L2AQ5JQF8 200 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 TSPO2Q5TGU0 170 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 PLCXD3Q63HM9 321 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 KCTD9Q7L273 389 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 OVCH2Q7RTZ1 564 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 WFDC11Q8NEX6 87 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 OR5D18Q8NGL1 313 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 OR5L1Q8NGL2 311 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 FNDC9Q8TBE3 224 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 ABHD3Q8WU67 409 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 WNT2BQ93097 391 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 HIST1H2AAQ96QV6 131 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 CMSS1Q9BQ75 279 aaKnown RBP11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 GLRX2Q9NS18 164 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 C1orf123Q9NWV4 160 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 RDH8Q9NYR8 311 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 TNFSF18Q9UNG2 199 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF175Q9Y473 711 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms