RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ZNF239Q16600 458 aaKnown RBP10.33□□□□□ -0.76
PCNX4-204ENST00000406949 ZNF529Q6P280 563 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 EXTL1Q92935 676 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 PRRX2Q99811 253 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 RNF126Q9BV68 326 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 FAM86C1Q9NVL1 165 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 KCNS2Q9ULS6 477 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 OSGIN2Q9Y236 505 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 ZNF175Q9Y473 711 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 SYNGR3O43761 229 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 PDCD6O75340 191 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 FUT3P21217 361 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 AKR1C3P42330 323 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 ARG2P78540 354 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 Q0VFX4 171 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 TMEM217Q8N7C4 229 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 TAAR9Q96RI9 348 aa10.33□□□□□ -0.76
PCNX4-204ENST00000406949 CACNA1BQ00975 2339 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 NTN3O00634 580 aaPredicted RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 CNOT4O95628 575 aaKnown RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 NTF4P34130 210 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 ID4P47928 161 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 TMEM33P57088 247 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 PRDX4Q13162 271 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 GUCA2BQ16661 112 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 RSPO1Q2MKA7 263 aaPredicted RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 LGI3Q8N145 548 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 NUDT16L1Q9BRJ7 211 aaKnown RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 FOXD3Q9UJU5 478 aaPredicted RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 MEX3AA1L020 520 aaKnown RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 ABCD4O14678 606 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 ECI1P42126 302 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 OR51H1Q8NH63 302 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 PSMF1Q92530 271 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 SIGLEC12Q96PQ1 595 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 FAM173AQ9BQD7 235 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 SLC2A9Q9NRM0 540 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 TMEM218A2RU14 115 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 CTSDP07339 412 aaPredicted RBP10.32□□□□□ -0.76
PCNX4-204ENST00000406949 AADACP22760 399 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 FAM3AP98173 230 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 ZNF273Q14593 569 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 ZNF488Q96MN9 340 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 CNTNAP3Q9BZ76 1288 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 NAA60Q9H7X0 242 aa10.32□□□□□ -0.76
PCNX4-204ENST00000406949 COL4A2P08572 1712 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 IGKV1-27A0A075B6S5 117 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 ARGFXA6NJG6 315 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 TNFSF15O95150 251 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 BCL3P20749 454 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 NOVA1P51513 510 aaKnown RBP10.31□□□□□ -0.76
PCNX4-204ENST00000406949 TFAP2EQ6VUC0 442 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 CALHM1Q8IU99 346 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 OR2M7Q8NG81 312 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 C20orf24Q9BUV8 137 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 DNTTIP1Q9H147 329 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 ATG12O94817 140 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 CYC1P08574 325 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 CALCRP30988 508 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 TSC22D1Q15714 1073 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 C5orf24Q7Z6I8 188 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 ZDHHC23Q8IYP9 409 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 FAM89BQ8N5H3 189 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 OR10Z1Q8NGY1 313 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 FAM213BQ8TBF2 198 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 FOXJ2Q9P0K8 574 aa10.31□□□□□ -0.76
PCNX4-204ENST00000406949 TRAV39A0A0B4J263 110 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 LRRC3CA6NJW4 275 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 ZNF716A6NP11 495 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 PRSS47A8MTI9 375 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 ST8SIA3O43173 380 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 SLC34A2O95436 690 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 ONECUT2O95948 504 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 FOXG1P55316 489 aaPredicted RBP10.3□□□□□ -0.76
PCNX4-204ENST00000406949 RPP30P78346 268 aaKnown RBP10.3□□□□□ -0.76
PCNX4-204ENST00000406949 CLN3Q13286 438 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 TMPRSS7Q7RTY8 843 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 DPPA2Q7Z7J5 298 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 GGNQ86UU5 652 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 RNF138Q8WVD3 245 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 C10orf35Q96D05 121 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 RBMXL2O75526 392 aaKnown RBP10.3□□□□□ -0.76
PCNX4-204ENST00000406949 DKK1O94907 266 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 SNAPINO95295 136 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 CTSSP25774 331 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 SURF2Q15527 256 aaPredicted RBP10.3□□□□□ -0.76
PCNX4-204ENST00000406949 CMTM1Q8IZ96 169 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 CNEP1R1Q8N9A8 125 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 CCDC54Q8NEL0 328 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 RGCCQ9H4X1 137 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 OR14J1Q9UGF5 321 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 MED13Q9UHV7 2174 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 IGKV1-12A0A0C4DH73 117 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 A6NLC8 198 aa10.3□□□□□ -0.76
PCNX4-204ENST00000406949 B4E171 279 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms