RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ETFDHQ16134 617 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 C10orf90Q96M02 699 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 IGHV1-45A0A0A0MS14 117 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 OR2M5A3KFT3 312 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 MS4A18H0YCH9 400 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 MS4A18Q3C1V0 323 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 RAXQ9Y2V3 346 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 A0A1W2PQM1 296 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 TBX19O60806 448 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 MMP7P09237 267 aaPredicted RBP12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 TMEM88Q6PEY1 159 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 MOGAT1Q96PD6 335 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 FGF2P09038 288 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 HIST1H1DP16402 221 aaKnown RBP12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 HOXA6P31267 233 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 SLC25A1P53007 311 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 RPS4XP62701 263 aaKnown RBP12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 IGFBP7Q16270 282 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 FA2HQ7L5A8 372 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 OR1B1Q8NGR6 318 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 SRRQ9GZT4 340 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 NIT2Q9NQR4 276 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 ZMIZ1Q9ULJ6 1067 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 CSF2RBP32927 897 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 C12orf73Q69YU5 71 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 PECRQ9BY49 303 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 SEBOXQ9HB31 216 aaPredicted RBP12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 UQCC1Q9NVA1 299 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 A0A1W2PPV9 198 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 RAB7AP51149 207 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 SKP2Q13309 424 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 CALHM3Q86XJ0 350 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 TTTY12Q9BZ98 90 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 IL20Q9NYY1 176 aa12.56□□□□□ -0.4
PCDHA11-201ENST00000398640 FPR2P25090 351 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 SSBP1Q04837 148 aaKnown RBP12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 PRR13Q9NZ81 148 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 PMCHP20382 165 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 RPL13AP40429 203 aaKnown RBP12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 MMP15P51511 669 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 TCRBV16S1A1N1A0A5B0 115 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 IGLV3-19P01714 112 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 IGHA2P01877 340 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 NHLRC2Q8NBF2 726 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 TINAGQ9UJW2 476 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 TRIM77I1YAP6 450 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 BCL2L11O43521 198 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 SELENOPP49908 381 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 WNT3P56703 355 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 CCDC190Q86UF4 302 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 SMIM4Q8WVI0 70 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 ACSM4P0C7M7 580 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 CTLA4P16410 223 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 SLC25A30Q5SVS4 291 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 CNTD2Q9H8S5 307 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 CYSLTR2Q9NS75 346 aa12.55□□□□□ -0.4
PCDHA11-201ENST00000398640 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 CDC34P49427 236 aaPredicted RBP12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 MYPOPQ86VE0 399 aaPredicted RBP12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 CACNG5Q9UF02 275 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 PRSS44E7EML9 344 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 ZFPL1O95159 310 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 FABP4P15090 132 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 GPR6P46095 362 aaPredicted RBP12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 CLEC9AQ6UXN8 241 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 THSD7BQ9C0I4 1608 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 LOC101059948A0A1B0GTJ6 334 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 CD96P40200 585 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 RAC3P60763 192 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 OR52L2PQ8NGH6 319 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 ARG1P05089 322 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 HLXQ14774 488 aaPredicted RBP12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 ZBTB44Q8NCP5 570 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 THYN1Q9P016 225 aa12.54□□□□□ -0.4
PCDHA11-201ENST00000398640 A0A1W2PN81 502 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 G0S2P27469 103 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 CHRNA7P36544 502 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 HOXA4Q00056 320 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms