RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 HPXP02790 462 aa23.1■■□□□ 1.29
CPNE1-203ENST00000397442 ZNF57Q68EA5 555 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-203ENST00000397442 TRAPPC6BQ86SZ2 158 aa23.1■■□□□ 1.29
CPNE1-203ENST00000397442 VRK1Q99986 396 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-203ENST00000397442 UBTD1Q9HAC8 227 aa23.1■■□□□ 1.29
CPNE1-203ENST00000397442 AK3Q9UIJ7 227 aa23.1■■□□□ 1.29
CPNE1-203ENST00000397442 PLEKHA6Q9Y2H5 1048 aa23.1■■□□□ 1.29
CPNE1-203ENST00000397442 OR2H2O95918 312 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 CYB5R3P00387 301 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 SSBP1Q04837 148 aaKnown RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 ARFRP1Q13795 201 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 FAM201AQ5SY85 155 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 FIP1L1Q6UN15 594 aaKnown RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 TOMM5Q8N4H5 51 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 BOLLQ8N9W6 283 aaKnown RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 POC5Q8NA72 575 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 OR11L1Q8NGX0 322 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 SETD6Q8TBK2 473 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 DYRK2Q92630 601 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 NPTNQ9Y639 398 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 ANKRD20A5PA0PJZ0 165 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 DEGS1O15121 323 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 HAND1O96004 215 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 INPP1P49441 399 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 CEBPDP49716 269 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 RGS21Q2M5E4 152 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 FAM90A1Q86YD7 464 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 GVQW1Q8N7I0 195 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 SUMF2Q8NBJ7 301 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 HDHD3Q9BSH5 251 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 C11orf54Q9H0W9 315 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 SPACA1Q9HBV2 294 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 FBXO9Q9UK97 447 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-203ENST00000397442 LAMP3Q9UQV4 416 aa23.09■■□□□ 1.29
CPNE1-203ENST00000397442 UBE2QL1A1L167 161 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 SH2D1BO14796 132 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 ZNF44P15621 663 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 DEFA1P59665 94 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 DEFA3P59666 94 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 NLKQ9UBE8 527 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 OR14J1Q9UGF5 321 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 ANAPC10Q9UM13 185 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 TENM4Q6N022 2769 aa23.08■■□□□ 1.29
CPNE1-203ENST00000397442 RFPL4AA6NLU0 287 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 RFPL4AL1F8VTS6 287 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 H3BUI4 141 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 SLC33A1O00400 549 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-203ENST00000397442 TFF1P04155 84 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 FCER2P06734 321 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 ACTBP60709 375 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 ACTG1P63261 375 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 SP5Q6BEB4 398 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-203ENST00000397442 OR5T2Q8NGG2 359 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 RDH5Q92781 318 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 OCSTAMPQ9BR26 566 aa23.07■■□□□ 1.28
CPNE1-203ENST00000397442 SIRPB1O00241 398 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 PSG2P11465 335 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 LMO1P25800 156 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 CD80P33681 288 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 TLE4Q04727 773 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 BPIFB2Q8N4F0 458 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 HPS1Q92902 700 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 DPCDQ9BVM2 203 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-203ENST00000397442 CACNG6Q9BXT2 260 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 WIPI2Q9Y4P8 454 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 IGKV1D-17A0A075B6S4 117 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 IGHV3OR15-7A0A075B7D8 119 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 VGLL3A8MV65 326 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 HSPB6O14558 160 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 GLAP06280 429 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 SFRP4Q6FHJ7 346 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-203ENST00000397442 CD177Q8N6Q3 437 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 PLEKHF2Q9H8W4 249 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 TMEM106BQ9NUM4 274 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 DNAJB11Q9UBS4 358 aa23.06■■□□□ 1.28
CPNE1-203ENST00000397442 IGHV1-69-2A0A0G2JMI3 117 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 LRRC30A6NM36 301 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 OR2AT4A6NND4 320 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 TMEM178BH3BS89 294 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 LYRM1O43325 122 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 SSX4O60224 188 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 ECDO95905 644 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-203ENST00000397442 IRF2P14316 349 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 RFX2P48378 723 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 DYRK1AQ13627 763 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 CCL17Q92583 94 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 CMSS1Q9BQ75 279 aaKnown RBP23.05■■□□□ 1.28
CPNE1-203ENST00000397442 SEBOXQ9HB31 216 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-203ENST00000397442 TAS2R8Q9NYW2 309 aa23.05■■□□□ 1.28
CPNE1-203ENST00000397442 MCRIP1C9JLW8 97 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 ZNF205O95201 554 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 CSF1P09603 554 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 GSTT2BP0CG30 244 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 RCVRNP35243 200 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 TEX36Q5VZQ5 186 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 Q6ZPA2 131 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 RAB1BQ9H0U4 201 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 CLEC4MQ9H2X3 399 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-203ENST00000397442 GLS2Q9UI32 602 aa23.04■■□□□ 1.28
CPNE1-203ENST00000397442 ZNF230Q9UIE0 474 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms