RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 K7N7A8 449 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 FUT6P51993 359 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 EWSR1Q01844 656 aaKnown RBP eCLIP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 IL11RAQ14626 422 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 OR8B8Q15620 311 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF391Q9UJN7 358 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 GJE1A6NN92 205 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 M0R036 132 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 PPYP01298 95 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 PRH1P02810 166 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 PMELP40967 661 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 ASCL1P50553 236 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 MLF1P58340 268 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 MALLQ13021 153 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 RBMS3Q6XE24 437 aaKnown RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 CALHM1Q8IU99 346 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 CCDC71LQ8N9Z2 235 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 OR2H1Q9GZK4 316 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 DMDP11532 3685 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 LINC01387J3KSC0 135 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 IGSF11Q5DX21 431 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 TMEM211Q6ICI0 200 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 MEX3BQ6ZN04 569 aaKnown RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 RPS19BP1Q86WX3 136 aaKnown RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF561Q8N587 486 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 SLC35B3Q9H1N7 401 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 FBXO7Q9Y3I1 522 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 TNRC6BQ9UPQ9 1833 aaKnown RBP13.56□□□□□ -0.24
HOXA3-202ENST00000396352 C3orf85A0A1B0GTC6 90 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 EDN3P14138 238 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 CBR1P16152 277 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 GLP1RP43220 463 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 PLCXD3Q63HM9 321 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 YRDCQ86U90 279 aaKnown RBP13.55□□□□□ -0.24
HOXA3-202ENST00000396352 AGBL5Q8NDL9 886 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 MR1Q95460 341 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 P4HTMQ9NXG6 502 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 NKX2-6A6NCS4 301 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF587BE7ETH6 402 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 MPPED1O15442 326 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 CXCL12P48061 93 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 HERV-K104P61576 105 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 FOXB1Q99853 325 aa13.55□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1B0GW64 132 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 hCG_1809904A0A1W2PP81 198 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PR64 198 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PRV1 198 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 RAB5AP20339 215 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 SULT1A1P50225 295 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 RHEBQ15382 184 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 KRBOX4Q5JUW0 171 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 LYSMD4Q5XG99 296 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 FAM213BQ8TBF2 198 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 SLC39A7Q92504 469 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 PIGCQ92535 297 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 CLDN23Q96B33 292 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 TMEM222Q9H0R3 208 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 WNT16Q9UBV4 365 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 SLC7A11Q9UPY5 501 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 IGSF23A1L1A6 192 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 SMIM6P0DI80 62 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 FUT3P21217 361 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 GNRHRP30968 328 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 NPBWR2P48146 333 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 RGS19P49795 217 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 CARD18P57730 90 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 CEACAM16Q2WEN9 425 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 AAED1Q7RTV5 226 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 BATF2Q8N1L9 274 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 OR2C3Q8N628 320 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF816-ZNF321PA0A0X1KG74 233 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 TRDCB7Z8K6 153 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 CDS2O95674 445 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 GNMTQ14749 295 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 HLA-BQ31612 363 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 ABLIM2Q6H8Q1 611 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF611Q8N823 705 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 IFI44Q8TCB0 444 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF442Q9H7R0 627 aa13.54□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1B0GV50 99 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 FAM24AA6NFZ4 105 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 ARG1P05089 322 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 KLK3P07288 261 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-202ENST00000396352 SRD5A2P31213 254 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 C5orf24Q7Z6I8 188 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 OR1J1Q8NGS3 322 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 LILRB1Q8NHL6 650 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-202ENST00000396352 NAT6Q93015 286 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 SEBOXQ9HB31 216 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-202ENST00000396352 CXCL13O43927 109 aa13.53□□□□□ -0.24
HOXA3-202ENST00000396352 OR7C1O76099 320 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-202ENST00000396352 S100A8P05109 93 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms