RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 MSMPQ1L6U9 139 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 ZNF660Q6AZW8 331 aaPredicted RBP12.71□□□□□ -0.37
CCT4-201ENST00000394440 TMEM211Q6ICI0 200 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 NLRC3Q7RTR2 1065 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 TMEM17Q86X19 198 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 OR2A7Q96R45 310 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 IFT22Q9H7X7 185 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 M0R1B8 84 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 FPR2P25090 351 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.37
CCT4-201ENST00000394440 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 HYLS1Q96M11 299 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 DMRTA2Q96SC8 542 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 ZNF442Q9H7R0 627 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 SH3BGRL2Q9UJC5 107 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 POLDIP2Q9Y2S7 368 aa12.71□□□□□ -0.37
CCT4-201ENST00000394440 GIPP09681 153 aaPredicted RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 PGA5P0DJD9 388 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 GCH1P30793 250 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 FABP6P51161 128 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 IFITM2Q01629 132 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 CHD3Q12873 2000 aaKnown RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 ITPR1Q14643 2758 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 NRIP2Q9BQI9 281 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 C5orf66Q9H5L9 145 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 FAM221AA4D161 298 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 TIMM8AO60220 97 aaPredicted RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 NAPSAO96009 420 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 ACAA1P09110 424 aaPredicted RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 KLRB1Q12918 225 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 IKZF1Q13422 519 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 PPP1R1AQ13522 171 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 RGS7BPQ6MZT1 257 aaPredicted RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 Q6ZS49 121 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 LYG2Q86SG7 212 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 Q8IYB0 196 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 TLNRD1Q9H1K6 362 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
CCT4-201ENST00000394440 PLSCR3Q9NRY6 295 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 DECR2Q9NUI1 292 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 FZR1Q9UM11 496 aa12.7□□□□□ -0.38
CCT4-201ENST00000394440 OR5H14A6NHG9 310 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 CDIPTO14735 213 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 HLA-AP01891 365 aaKnown RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 CRYAAP02489 173 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 ZNF250P15622 560 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 NPY4RP50391 375 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 ARPC4P59998 168 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 DHODHQ02127 395 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 LAMTOR1Q6IAA8 161 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 C12orf45Q8N5I9 185 aaPredicted RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 TMEM185AQ8NFB2 350 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 OR11H4Q8NGC9 324 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 TMEM230Q96A57 120 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 SPACA1Q9HBV2 294 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 POLEQ07864 2286 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 C9orf170A2RU37 121 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 NOS1APO75052 506 aaPredicted RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 DUSP1P28562 367 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 GLRXP35754 106 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 H2BFSP57053 126 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 SURF2Q15527 256 aaPredicted RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 SRSF7Q16629 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCT4-201ENST00000394440 GTF3AQ92664 365 aaKnown RBP12.69□□□□□ -0.38
CCT4-201ENST00000394440 VKORC1Q9BQB6 163 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 CXXC4Q9H2H0 198 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 ZNF286AQ9HBT8 521 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 NBEAQ8NFP9 2946 aa12.69□□□□□ -0.38
CCT4-201ENST00000394440 TRAV24A0A0B4J272 114 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 GLAP06280 429 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 TAS2R31P59538 309 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 MPPED2Q15777 294 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 Q6P435 159 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 SPERTQ8NA61 448 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 LIME1Q9H400 295 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 HES4Q9HCC6 221 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 F5H5P2 479 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 C16orf97H3BN30 126 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 OR5H8P0DN80 308 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 Q5BKY6 102 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 SLC22A25Q6T423 547 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 OR2T35Q8NGX2 323 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 MITD1Q8WV92 249 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 WDR89Q96FK6 387 aaPredicted RBP12.68□□□□□ -0.38
CCT4-201ENST00000394440 SCGB3A2Q96PL1 93 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
CCT4-201ENST00000394440 MSL2Q9HCI7 577 aa12.68□□□□□ -0.38
CCT4-201ENST00000394440 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms