RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SLC19A1P41440 591 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 FAM53AQ6NSI3 398 aaPredicted RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 SLC35E3Q7Z769 313 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 FGF14Q92915 247 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 NAA50Q9GZZ1 169 aaKnown RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 C19orf53Q9UNZ5 99 aaPredicted RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 MCM3APO60318 1980 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF121P58317 390 aaPredicted RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 OR8I2Q8N0Y5 310 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 S1PR2O95136 353 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 LIPFP07098 398 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 OR4A8P0C604 315 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 LILRA3Q8N6C8 439 aaPredicted RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 SLC2A10O95528 541 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 CD27P26842 260 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 PPICP45877 212 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 ABHD17CQ6PCB6 329 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 OLIG3Q7RTU3 272 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 GBGT1Q8N5D6 347 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 TRAV38-1A0A0B4J264 116 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 GPR3P46089 330 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 WNT3P56703 355 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 SNRPNP63162 240 aaKnown RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 OR4B1Q8NGF8 309 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 NOTCH3Q9UM47 2321 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 ZBTB34Q8NCN2 500 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 THAP10Q9P2Z0 257 aaPredicted RBP13.18□□□□□ -0.3
CCDC50-201ENST00000392455 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 HOXC4P09017 264 aaPredicted RBP13.17□□□□□ -0.3
CCDC50-201ENST00000392455 OR5AC1P0C628 307 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 CDK5R1Q15078 307 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 OR1F12Q8NHA8 337 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 TBX15Q96SF7 602 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 HIST1H4GQ99525 98 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 FUCA1P04066 466 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 LGALS3P17931 250 aaKnown RBP13.17□□□□□ -0.3
CCDC50-201ENST00000392455 CEACAM6P40199 344 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 FAM53BQ14153 422 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 TMEM52BQ4KMG9 183 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 MRM1Q6IN84 353 aaKnown RBP13.17□□□□□ -0.3
CCDC50-201ENST00000392455 FAHD1Q6P587 224 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 GALNT14Q96FL9 552 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 ZIC5Q96T25 663 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 TIMP4Q99727 224 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 TINAGL1Q9GZM7 467 aaPredicted RBP13.17□□□□□ -0.3
CCDC50-201ENST00000392455 PRSS50Q9UI38 385 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 A8MWL6 223 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 GSG1Q2KHT4 349 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 SLC37A2Q8TED4 501 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 RND1Q92730 232 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
CCDC50-201ENST00000392455 EMC6Q9BV81 110 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 CCSMST1Q4G0I0 132 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF665Q9H7R5 613 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 HOXA6P31267 233 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 AESQ08117 197 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 DEGS2Q6QHC5 323 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 CADM3Q8N126 398 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 HRO43593 1189 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 XKR7Q5GH72 579 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 MRGPRGQ86SM5 289 aa13.17□□□□□ -0.3
CCDC50-201ENST00000392455 F2RL2O00254 374 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 GZMKP49863 264 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 CCDC190Q86UF4 302 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 NUDCD2Q8WVJ2 157 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 AQP10Q96PS8 301 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 MAGT1Q9H0U3 335 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 IL20Q9NYY1 176 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 C17orf51A8MQB3 221 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 LYZP61626 148 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 SPNS3Q6ZMD2 512 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 SLC25A40Q8TBP6 338 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 MFRPQ9BY79 579 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 A0A0B4J293 547 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 FRG2CA6NGY1 282 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 SLC25A20O43772 301 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 EBLN2Q6P2I7 272 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 ELSPBP1Q96BH3 223 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 IGHV3-64DA0A0J9YX35 117 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF195O14628 629 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 NDUFB6O95139 128 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF25P17030 456 aaPredicted RBP13.16□□□□□ -0.3
CCDC50-201ENST00000392455 MBNL1Q9NR56 388 aaKnown RBP13.16□□□□□ -0.3
CCDC50-201ENST00000392455 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 CLEC2DQ9UHP7 191 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms