RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 PRSS44E7EML9 344 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 CREBL2O60519 120 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-202ENST00000372405 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 OR4E1P0C645 316 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 UBE2MP61081 183 aaKnown RBP11.68□□□□□ -0.54
PTPRF-202ENST00000372405 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 CHRFAM7AQ494W8 412 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 PRAMEF6Q5VXH4 476 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 Q6P435 159 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 WFDC8Q8IUA0 241 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 ZDHHC22Q8N966 263 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 MARCH1Q8TCQ1 289 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
PTPRF-202ENST00000372405 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 C12orf4Q9NQ89 552 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 ING3Q9NXR8 418 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 EDARQ9UNE0 448 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 OSGIN2Q9Y236 505 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 POLDIP2Q9Y2S7 368 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 SPEF1Q9Y4P9 236 aa11.68□□□□□ -0.54
PTPRF-202ENST00000372405 IGLV3-9A0A075B6K5 115 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 DPRXA6NFQ7 191 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 ZSCAN5BA6NJL1 495 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 HSPB6O14558 160 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 NAPSAO96009 420 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 OR3A3P47888 321 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 GMFBP60983 142 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 LINC00596Q86U02 117 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 ZBTB8BQ8NAP8 495 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 ADAD2Q8NCV1 583 aaKnown RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 FAM122AQ96E09 287 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 PPA2Q9H2U2 334 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 LIME1Q9H400 295 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 RHOFQ9HBH0 211 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 GPN1Q9HCN4 374 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 CA10Q9NS85 328 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 ZNF222Q9UK12 451 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 MEIKINA0A087WXM9 373 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 NPY4RP50391 375 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 CASP6P55212 293 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 TSPAN5P62079 268 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 MRPS15P82914 257 aaKnown RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 CDK10Q15131 360 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 C4orf46Q504U0 113 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 ZNF660Q6AZW8 331 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 WDR82Q6UXN9 313 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 C5orf24Q7Z6I8 188 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 SLC25A42Q86VD7 318 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
PTPRF-202ENST00000372405 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 NPTNQ9Y639 398 aa11.67□□□□□ -0.54
PTPRF-202ENST00000372405 OR5H14A6NHG9 310 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 CCL21O00585 134 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 WNT9BO14905 357 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 NOS1APO75052 506 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-202ENST00000372405 ZNF205O95201 554 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 ACAA1P09110 424 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-202ENST00000372405 PLA2G5P39877 138 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 KLF3P57682 345 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-202ENST00000372405 DHRS2Q13268 280 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 KCNJ8Q15842 424 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 TMEM108Q6UXF1 575 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 PEG10Q86TG7 708 aaKnown RBP11.66□□□□□ -0.54
PTPRF-202ENST00000372405 NOXA1Q86UR1 476 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 Q8IYB0 196 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 POC1AQ8NBT0 407 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 OR2Z1Q8NG97 314 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 RDH5Q92781 318 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 WDR13Q9H1Z4 485 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 UFSP2Q9NUQ7 469 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
PTPRF-202ENST00000372405 ROS1P08922 2347 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 HS3ST1O14792 307 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 FABP7O15540 132 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 TPD52L2O43399 206 aaKnown RBP11.65□□□□□ -0.54
PTPRF-202ENST00000372405 NXPH2O95156 264 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 ANXA3P12429 323 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 ARPC4P59998 168 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 ADORA2A-AS1P86434 159 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 BSPH1Q075Z2 132 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 ZNF146Q15072 292 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 CDSNQ15517 529 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 C20orf204Q6ZNR8 217 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 SPERTQ8NA61 448 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
PTPRF-202ENST00000372405 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
PTPRF-202ENST00000372405 WDR89Q96FK6 387 aaPredicted RBP11.65□□□□□ -0.54
PTPRF-202ENST00000372405 DIDO1Q9BTC0 2240 aaKnown RBP11.65□□□□□ -0.54
PTPRF-202ENST00000372405 ACACBO00763 2458 aa11.65□□□□□ -0.55
PTPRF-202ENST00000372405 MCRIP1C9JLW8 97 aa11.65□□□□□ -0.55
PTPRF-202ENST00000372405 ABCD4O14678 606 aa11.65□□□□□ -0.55
PTPRF-202ENST00000372405 C1QBP02746 253 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms