RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZNF92Q03936 586 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 TAF13Q15543 124 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 GLYATL3Q5SZD4 288 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 OR2G6Q5TZ20 316 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 PRSS35Q8N3Z0 413 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 ZNF283Q8N7M2 679 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 OR2AE1Q8NHA4 323 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 RPS4Y2Q8TD47 263 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 RORBQ92753 470 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 YIPF5Q969M3 257 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 APOBEC3DQ96AK3 386 aaPredicted RBP6.47□□□□□ -1.37
YBX3-204ENST00000366290 PELI1Q96FA3 418 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 TMEM80Q96HE8 168 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 LYZL4Q96KX0 146 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 C4orf36Q96KX1 117 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 MROQ9BYG7 248 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 TPK1Q9H3S4 243 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 NIPAL2Q9H841 368 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 INPP5EQ9NRR6 644 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 PTTG3PQ9NZH4 202 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 R4GMQ9 66 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 DYSFO75923 2080 aa6.46□□□□□ -1.37
YBX3-204ENST00000366290 hCG_38984A0A1B0GV85 526 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 TMEM269A0A1B0GVZ9 245 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 hCG_1809904A0A1W2PP81 198 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 A0A1W2PPE2 198 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 A0A1W2PR64 198 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 IRGMA1A4Y4 181 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 LYNX1G3V0Z9 82 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 RPP14O95059 124 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 IGHV1-46P01743 117 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 TTRP02766 147 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 MT-ND2P03891 347 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 KRT8P05787 483 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 LYNX1P0DP58 116 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 MAGEB1P43366 347 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 KIR3DL2P43630 455 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 KRTAP10-11P60412 298 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 CCL8P80075 99 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 PSG7Q13046 419 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 GK2Q14410 553 aaPredicted RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 WDR38Q5JTN6 314 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 RBM48Q5RL73 367 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 RNLSQ5VYX0 342 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 XAF1Q6GPH4 301 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 FBXW12Q6X9E4 464 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 CATSPERDQ86XM0 798 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 PHC2Q8IXK0 858 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 C1orf87Q8N0U7 546 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 SYS1Q8N2H4 156 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 GCSAMQ8N6F7 178 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 YIPF7Q8N8F6 280 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 OR2G2Q8NGZ5 317 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 SPRYD4Q8WW59 207 aaPredicted RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 GTF3AQ92664 365 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 SGK3Q96BR1 496 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 HAVCR1Q96D42 359 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 CMBLQ96DG6 245 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 PBOV1Q9GZY1 135 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 PPIL3Q9H2H8 161 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 Q9H521 79 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 ZNF275Q9NSD4 429 aaPredicted RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 ERVK-18Q9QC07 812 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 NUFIP1Q9UHK0 495 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 GNG8Q9UK08 70 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 SLC22A13Q9Y226 551 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 LSM2Q9Y333 95 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 CAB39Q9Y376 341 aaPredicted RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 EXOSC1Q9Y3B2 195 aaKnown RBP6.46□□□□□ -1.38
YBX3-204ENST00000366290 DOCK11Q5JSL3 2073 aa6.46□□□□□ -1.38
YBX3-204ENST00000366290 ANK2Q01484 3957 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 A0A0U1RQV5 110 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 A0A1B0GTI1 187 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 A0A1W2PP11 408 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 PLSCR5A0PG75 271 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ZSCAN5BA6NJL1 495 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ACOD1A6NK06 481 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 OR4C45A6NMZ5 311 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 LOC110117498-PIK3R3F6TDL0 507 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 J3QLW9 94 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 J3QR06 171 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 APOC1P02654 83 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ZNF19P17023 458 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ACKR3P25106 362 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 IL2RGP31785 369 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 GTF2A1P52655 376 aaPredicted RBP6.45□□□□□ -1.38
YBX3-204ENST00000366290 ACTA2P62736 377 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ACTG2P63267 376 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 FAM3AP98173 230 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 MED21Q13503 144 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 CARTPTQ16568 116 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ZNF829Q3KNS6 432 aaPredicted RBP6.45□□□□□ -1.38
YBX3-204ENST00000366290 OR2T2Q6IF00 324 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 FAM166AQ6J272 317 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 Q6ZR03 302 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 Q6ZSR3 168 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 PRSS48Q7RTY5 328 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 EGFL6Q8IUX8 553 aa6.45□□□□□ -1.38
YBX3-204ENST00000366290 ELMOD2Q8IZ81 293 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms