RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CMBLQ96DG6 245 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 YIPF6Q96EC8 236 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 SPNS1Q9H2V7 528 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 ZNF275Q9NSD4 429 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 SS18L1O75177 396 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 IGHA1P01876 353 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 IGHA2P01877 340 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 RAC3P60763 192 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 CLEC9AQ6UXN8 241 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 BHLHA15Q7RTS1 189 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 CXorf67Q86X51 503 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 FAM219AQ8IW50 185 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 ZNF596Q8TC21 504 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 DUSP21Q9H596 190 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 SAP30LQ9HAJ7 183 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 LYZP61626 148 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 IL24Q13007 206 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 TMEM196Q5HYL7 178 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 ETV3LQ6ZN32 361 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 CADM3Q8N126 398 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 SNRNP40Q96DI7 357 aaKnown RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 WSB1Q9Y6I7 421 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 ISLRO14498 428 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 PDCD6O75340 191 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 CDC34P49427 236 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 SCN4AP35499 1836 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 TMEM241Q24JQ0 296 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 Q6ZN92 141 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 FCN1O00602 326 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 FOXO1Q12778 655 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 OR4D10Q8NGI6 311 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 RBM14Q96PK6 669 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 DNAJB12Q9NXW2 375 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 ANK1P16157 1881 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 ANKHD1Q8IWZ3 2542 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 ALS2Q96Q42 1657 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 C3orf85A0A1B0GTC6 90 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PLPP2O43688 288 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 OR5M9Q8NGP3 310 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 MRPL37Q9BZE1 423 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 RCL1Q9Y2P8 373 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 COMPP49747 757 aaPredicted RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 CEBPEQ15744 281 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 ANKRD55Q3KP44 614 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 CNRIP1Q96F85 164 aaPredicted RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 RAB33BQ9H082 229 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 MS4A5Q9H3V2 200 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 HEXA-AS1Q9H8Q6 139 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 SFTA3P0C7M3 94 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 UBE2L3P68036 154 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 OR5C1Q8NGR4 320 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 FAM221AA4D161 298 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 MBTPS2O43462 519 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 GZMHP20718 246 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 DCTDP32321 178 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 Q6ZNX1 250 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 MUC20Q8N307 709 aaPredicted RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 FBXL6Q8N531 539 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 RND1Q92730 232 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 NARFLQ9H6Q4 476 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PRNDQ9UKY0 176 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PATJQ8NI35 1801 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 ZC3H12DA2A288 527 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 LRRC29Q8WV35 223 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PARD6AQ9NPB6 346 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 GPX5O75715 221 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 RHBDL1O75783 438 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PMP22Q01453 160 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 FAM209AQ5JX71 171 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 C20orf196Q8IYI0 205 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 ZNF107Q9UII5 783 aaPredicted RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 TMEM210A6NLX4 147 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 B4GALT3O60512 393 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 KRTCAP3Q53RY4 240 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 Q7L0L9 218 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PIPOXQ9P0Z9 390 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 HMSDA8MTL9 139 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 DUXBA0A1W2PPF3 345 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 CTAG2O75638 210 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 CD3DP04234 171 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 SMIM18P0DKX4 95 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 PPP1CCP36873 323 aaKnown RBP8.61□□□□□ -1.03
CUX1-203ENST00000360264 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 NAA60Q9H7X0 242 aa8.61□□□□□ -1.03
CUX1-203ENST00000360264 SCN10AQ9Y5Y9 1956 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 IGHV3-64DA0A0J9YX35 117 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 CXorf1O96002 111 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 OR4A8P0C604 315 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 SLC35B1P78383 322 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 SLC25A30Q5SVS4 291 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 RTN4RL1Q86UN2 441 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 GNG7O60262 68 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 MTFP1Q9UDX5 166 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms