RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 HIST1H2BJP06899 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BOP23527 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 DTYMKP23919 212 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BBP33778 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BDP58876 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BCP62807 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 RUNX1Q01196 453 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST2H2BEQ16778 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BHQ93079 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 MOB3AQ96BX8 217 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BNQ99877 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BMQ99879 126 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 ANGPTL4Q9BY76 406 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 TGIF2Q9GZN2 237 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 PRDM13Q9H4Q3 707 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 RALGAPA1Q6GYQ0 2036 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 TMEM50AO95807 157 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 SOD3P08294 240 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 CD27P26842 260 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 UBE2KP61086 200 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 GNMTQ14749 295 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 ICAM4Q14773 271 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
RPE-202ENST00000359429 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 OR10D4PQ8NGN7 298 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 RHOVQ96L33 236 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
RPE-202ENST00000359429 TERTO14746 1132 aaKnown RBP9.42□□□□□ -0.9
RPE-202ENST00000359429 DUX1O43812 170 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 CST7O76096 145 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 NXPH3O95157 252 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 TRGC2P03986 189 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 GUCA1AP43080 201 aaPredicted RBP9.42□□□□□ -0.9
RPE-202ENST00000359429 H3F3AP84243 136 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
RPE-202ENST00000359429 C10orf128Q5T292 105 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 RHBDD2Q6NTF9 364 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 ZNF429Q86V71 674 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 ZNF610Q8N9Z0 462 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 GPR61Q9BZJ8 451 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 ZNF700Q9H0M5 742 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 TMED3Q9Y3Q3 217 aa9.42□□□□□ -0.9
RPE-202ENST00000359429 SDK1Q7Z5N4 2213 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 IGLV3-12A0A075B6K2 115 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 LOC102725191A0A1B0GVB3 256 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 TLX3O43711 291 aaPredicted RBP9.41□□□□□ -0.9
RPE-202ENST00000359429 SSSCA1O60232 199 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 HNRNPKP61978 463 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPE-202ENST00000359429 NKAIN1Q4KMZ8 207 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 TMEM217Q8N7C4 229 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 OR5C1Q8NGR4 320 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 OR14L1PQ8NHC6 308 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 TMEM54Q969K7 222 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 PARPBPQ9NWS1 579 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 SEMA5BQ9P283 1151 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 SLC7A11Q9UPY5 501 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 CNTRLQ7Z7A1 2325 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 C3orf85A0A1B0GTC6 90 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 DHHO43323 396 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 PIAS2O75928 621 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 SCAF4O95104 1147 aaKnown RBP9.41□□□□□ -0.9
RPE-202ENST00000359429 PATE4P0C8F1 98 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 S100A2P29034 98 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 LTBRP36941 435 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 SHBQ15464 509 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 TMEM123Q8N131 208 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 INTS12Q96CB8 462 aaKnown RBP9.41□□□□□ -0.9
RPE-202ENST00000359429 SYT3Q9BQG1 590 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 SMDT1Q9H4I9 107 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 P4HTMQ9NXG6 502 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 KIAA1456Q9P272 454 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 ST3GAL6Q9Y274 331 aa9.41□□□□□ -0.9
RPE-202ENST00000359429 TRDCB7Z8K6 153 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 MPPED1O15442 326 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 CYB5BO43169 146 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 DKK1O94907 266 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 PPYP01298 95 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 GNRHRP30968 328 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
RPE-202ENST00000359429 RGS19P49795 217 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 DYNLT3P51808 116 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 ZNF266Q14584 549 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 UNQ6494/PRO21346Q6UXR6 183 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 FOXL2NBQ6ZUU3 175 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 P4HA3Q7Z4N8 544 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 FADS6Q8N9I5 356 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 SPSB1Q96BD6 273 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 C10orf35Q96D05 121 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 RASL10BQ96S79 203 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 AKIRIN1Q9H9L7 192 aaPredicted RBP9.4□□□□□ -0.9
RPE-202ENST00000359429 MTCH2Q9Y6C9 303 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 WSB1Q9Y6I7 421 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 PITX3O75364 302 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 CRYGSP22914 178 aa9.4□□□□□ -0.9
RPE-202ENST00000359429 RBP2P50120 134 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms