RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RDH5Q92781 318 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 ARL11Q969Q4 196 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 TNFSF18Q9UNG2 199 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 AGFG2O95081 481 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 NME2P22392 152 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 CNN3Q15417 329 aaKnown RBP12.02□□□□□ -0.49
TRIM4-201ENST00000349062 ABLIM2Q6H8Q1 611 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 SLC22A25Q6T423 547 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 OR5M8Q8NGP6 311 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF318Q5VUA4 2279 aa12.02□□□□□ -0.49
TRIM4-201ENST00000349062 RNF222A6NCQ9 220 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 TTLL8A6PVC2 850 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 MFNGO00587 321 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 TMEM127O75204 238 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 OR2F2O95006 317 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 ERVS71-1P61550 626 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 EIF3IQ13347 325 aaKnown RBP12.01□□□□□ -0.49
TRIM4-201ENST00000349062 OR2F1Q13607 317 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 PEA15Q15121 130 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 SPIN3Q5JUX0 258 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 C14orf79Q96F83 325 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 C5orf66Q9H5L9 145 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 SPRR3Q9UBC9 169 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 SH3BGRL2Q9UJC5 107 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF732B4DXR9 585 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 EFSO43281 561 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 EIF3GO75821 320 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRIM4-201ENST00000349062 SNAPC5O75971 98 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 CA6P23280 308 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 PPT1P50897 306 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 EIF4E3Q8N5X7 224 aaKnown RBP12.01□□□□□ -0.49
TRIM4-201ENST00000349062 SMIM3Q9BZL3 60 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 V9GYS6 101 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 A0A0A6YYH2 397 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 A6NJ64 397 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 GSTP1P09211 210 aaKnown RBP12.01□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF708P17019 499 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 ID4P47928 161 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF529Q6P280 563 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 MEX3BQ6ZN04 569 aaKnown RBP12.01□□□□□ -0.49
TRIM4-201ENST00000349062 DNM1P46Q6ZS02 220 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 OR5L1Q8NGL2 311 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 RSRP1Q9BUV0 290 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 RPS10P5Q9NQ39 176 aa12.01□□□□□ -0.49
TRIM4-201ENST00000349062 SNAPINO95295 136 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 CD74P04233 296 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 PRF1P14222 555 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 DAOP14920 347 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 CD80P33681 288 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 MALLQ13021 153 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 PRDX4Q13162 271 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF528Q3MIS6 628 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 FAM76BQ5HYJ3 339 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 ISOC2Q96AB3 205 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 KIAA1549Q9HCM3 1950 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 OR5H8P0DN80 308 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 BCL3P20749 454 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 CCL1P22362 96 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 APLNRP35414 380 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 ABCA11PQ4W5N1 156 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 CRIP3Q6Q6R5 217 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 OR10AD1Q8NGE0 317 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 IL1F10Q8WWZ1 152 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 LOXL4Q96JB6 756 aa12□□□□□ -0.49
TRIM4-201ENST00000349062 BARX1Q9HBU1 254 aaPredicted RBP12□□□□□ -0.49
TRIM4-201ENST00000349062 C14orf166Q9Y224 244 aaKnown RBP12□□□□□ -0.49
TRIM4-201ENST00000349062 M0R036 132 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 SNRNP70P08621 437 aaKnown RBP11.99□□□□□ -0.49
TRIM4-201ENST00000349062 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
TRIM4-201ENST00000349062 ZBTB25P24278 435 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 OTX1P32242 354 aaPredicted RBP11.99□□□□□ -0.49
TRIM4-201ENST00000349062 SLC25A42Q86VD7 318 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 OSR2Q8N2R0 312 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 ZSCAN4Q8NAM6 433 aaPredicted RBP11.99□□□□□ -0.49
TRIM4-201ENST00000349062 PTX4Q96A99 478 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 ZFP57Q9NU63 452 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 SYNGR1O43759 233 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 MPPED2Q15777 294 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 BAP18Q8IXM2 172 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF816-ZNF321PA0A0X1KG74 233 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 MED19A0JLT2 244 aaPredicted RBP11.99□□□□□ -0.49
TRIM4-201ENST00000349062 FABP1P07148 127 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 ALKBH6Q3KRA9 238 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 MDP1Q86V88 176 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 OR11L1Q8NGX0 322 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 GLYATL2Q8WU03 294 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
TRIM4-201ENST00000349062 AKAP6Q13023 2319 aa11.99□□□□□ -0.49
TRIM4-201ENST00000349062 ABCA4P78363 2273 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 NME2P1O60361 137 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 GRPP07492 148 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF14P17017 642 aaPredicted RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 FCGR2CP31995 323 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 CEBPGP53567 150 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 ANKRD55Q3KP44 614 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 OR5AP2Q8NGF4 316 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms