RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SCMH1Q96GD3 660 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF2Q9BSG1 426 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-202ENST00000346436 TPPP3Q9BW30 176 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 A0A1W2PRD5 423 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 A0A1W2PRF3 423 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 A0A1W2PRM7 423 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 TXNDC12O95881 172 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 ERGP11308 486 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 DHRS2Q13268 280 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 SMUG1Q53HV7 270 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 LYG2Q86SG7 212 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 OR11H4Q8NGC9 324 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 TRIOBPQ9H2D6 2365 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 KCNAB3O43448 404 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 PTP4A3O75365 173 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 SLC25A1P53007 311 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 GFRA1P56159 465 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 FOXO1Q12778 655 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 PRDX4Q13162 271 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 PPP1R1AQ13522 171 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF141Q15928 474 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 SUMF2Q8NBJ7 301 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 SAT2Q96F10 170 aaPredicted RBP9.58□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF75AQ96N20 296 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 OR2F2O95006 317 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 HPNP05981 417 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 CCL3P10147 92 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 ZBTB25P24278 435 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 CD80P33681 288 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 OR2F1Q13607 317 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 PDCD1Q15116 288 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 AICDAQ9GZX7 198 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 DOCK6Q96HP0 2047 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 IL5P05113 134 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 OR13C7P0DN81 318 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 PTGFRP43088 359 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 S100A12P80511 92 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 OR6X1Q8NH79 312 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 CNTNAP3Q9BZ76 1288 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 CACNA1GO43497 2377 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 RECKO95980 971 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 RBP4P02753 201 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 TAF9Q16594 264 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 MOGAT3Q86VF5 341 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 OR52N4Q8NGI2 321 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 IL36GQ9NZH8 169 aa9.58□□□□□ -0.88
CLCN6-202ENST00000346436 MRPS18BQ9Y676 258 aaKnown RBP9.58□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF320A2RRD8 509 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 TMEM210A6NLX4 147 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 DCTN6O00399 190 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 CLDN14O95500 239 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 OR5H8P0DN80 308 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 RPS10P46783 165 aaKnown RBP9.57□□□□□ -0.88
CLCN6-202ENST00000346436 INPP5JQ15735 1006 aaPredicted RBP9.57□□□□□ -0.88
CLCN6-202ENST00000346436 SLC25A45Q8N413 288 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 PGLYRP3Q96LB9 341 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 DCTN5Q9BTE1 182 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 PCDHGA9Q9Y5G4 932 aaKnown RBP9.57□□□□□ -0.88
CLCN6-202ENST00000346436 ZSWIM8A7E2V4 1837 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 MGMTP16455 207 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 FUT3P21217 361 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 FLI1Q01543 452 aaPredicted RBP9.57□□□□□ -0.88
CLCN6-202ENST00000346436 PDZK1IP1Q13113 114 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 ACSM6Q6P461 480 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 TMEM251Q8N6I4 163 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 SLC25A32Q9H2D1 315 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF629Q9UEG4 869 aaPredicted RBP9.57□□□□□ -0.88
CLCN6-202ENST00000346436 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 IGHV1-45A0A0A0MS14 117 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 RFPL4AA6NLU0 287 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 RFPL4AL1F8VTS6 287 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 FAHP16930 419 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 ID1P41134 155 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 C14orf79Q96F83 325 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 GUCD1Q96NT3 240 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 MIOXQ9UGB7 285 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 RER1O15258 196 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 CFDP00746 253 aaPredicted RBP9.57□□□□□ -0.88
CLCN6-202ENST00000346436 FAM106CPP0CH98 169 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 C11orf87Q6NUJ2 197 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 CD200R1LQ6Q8B3 271 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 TMEM229BQ8NBD8 167 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 OR4F5Q8NH21 305 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 FRZBQ92765 325 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 NPTNQ9Y639 398 aa9.57□□□□□ -0.88
CLCN6-202ENST00000346436 MED19A0JLT2 244 aaPredicted RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 C17orf51A8MQB3 221 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 FAM157AC9JC47 383 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 CYTIPO60759 359 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 FGF2P09038 288 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 CST2P09228 141 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 CALCRP30988 508 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 DCAF12L2Q5VW00 463 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ADPRHL1Q8NDY3 354 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms