RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C17orf112F2Z3M2 114 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 CD82P27701 267 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 ADPRHP54922 357 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 MESP2Q0VG99 397 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HERPUD1Q15011 391 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 OR13H1Q8NG92 308 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 GTF3AQ92664 365 aaKnown RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 STARD4Q96DR4 205 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HEYLQ9NQ87 328 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 SPTAN1Q13813 2472 aaKnown RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 TRBV5-7A0A0A0MS05 114 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 KIR2DS5A0A0G2JLQ3 304 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 A0A0G2JNG1 304 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 PRR32B1ATL7 298 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 KIR2DS3K7RE56 304 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 EIF4E2O60573 245 aaKnown RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 PPP1CAP62136 330 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 KIR2DS5Q14953 304 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 ADGRG7Q96K78 797 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 SMIM8Q96KF7 97 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 RSG1Q9BU20 258 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 NAT8Q9UHE5 227 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 AQP7P3A6NL99 342 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 IGKV1D-16P01601 117 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 HSD17B7P56937 341 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 OR5AS1Q8N127 324 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 OR10J5Q8NHC4 309 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 CCNL2Q96S94 520 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 FOXJ2Q9P0K8 574 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 FREM3P0C091 2139 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 SOD3P08294 240 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 DANCRP0C864 163 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 PTGER4P35408 488 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 DCAF7P61962 342 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 HLA-CQ95604 372 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 CHST5Q9GZS9 411 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF331Q9NQX6 463 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 SLC35D1Q9NTN3 355 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 BET1LQ9NYM9 111 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 ICAM5Q9UMF0 924 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 NYNRINQ9P2P1 1898 aaKnown RBP11.68□□□□□ -0.54
COL2A1-201ENST00000337299 HEATR5BQ9P2D3 2071 aa11.68□□□□□ -0.54
COL2A1-201ENST00000337299 AGAP20933 346 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 TEX30Q5JUR7 227 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 DGAT2L6Q6ZPD8 337 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 NDUFAF3Q9BU61 184 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 IGHV3-15A0A0B4J1V0 119 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 B4DEV8 164 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 H0YIG0 161 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 CRYAAP02489 173 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 CD1AP06126 327 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 TCN2P20062 427 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 COX5AP20674 150 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 FUT3P21217 361 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 TMEM196Q5HYL7 178 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 ATG4DQ86TL0 474 aaPredicted RBP11.67□□□□□ -0.54
COL2A1-201ENST00000337299 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 MOB1AQ9H8S9 216 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 YBX2Q9Y2T7 364 aaKnown RBP11.67□□□□□ -0.54
COL2A1-201ENST00000337299 PSME4Q14997 1843 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 DUXBA0A1W2PPF3 345 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 OLFM2O95897 454 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 CNN1P51911 297 aaKnown RBP11.67□□□□□ -0.54
COL2A1-201ENST00000337299 OR10P1Q8NGE3 313 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 LPAR5Q9H1C0 372 aa11.67□□□□□ -0.54
COL2A1-201ENST00000337299 DOCK8Q8NF50 2099 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 GCGP01275 180 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 SLC25A6P12236 298 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 ERVFC1-1P60608 527 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 STPG1Q5TH74 334 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 ST6GALNAC3Q8NDV1 305 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF236Q9UL36 1845 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 C9JQL5 133 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF217O75362 1048 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-201ENST00000337299 KRASP01116 189 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF17P17021 662 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 CD38P28907 300 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 TCL1AP56279 114 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL2A1-201ENST00000337299 MCHR2Q969V1 340 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 CACNG5Q9UF02 275 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 BLACEA4D250 179 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 NRASP01111 189 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 INSM1Q01101 510 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-201ENST00000337299 POC1AQ8NBT0 407 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 OR5AU1Q8NGC0 362 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 OR52M1Q8NGK5 317 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 NT5CQ8TCD5 201 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms