RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TP53RKQ96S44 253 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 OR2H1Q9GZK4 316 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 SPACA1Q9HBV2 294 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
CLK1-201ENST00000321356 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 PHF1O43189 567 aaPredicted RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 C1QL1O75973 258 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 KLK3P07288 261 aaPredicted RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 PATE4P0C8F1 98 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 GLI4P10075 376 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 HERV-K104P61576 105 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 SRPXP78539 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 EWSR1Q01844 656 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLK1-201ENST00000321356 NHLH2Q02577 135 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 RHEBQ15382 184 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 LYSMD4Q5XG99 296 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM185AQ8N0U4 392 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ZNF561Q8N587 486 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 LFNGQ8NES3 379 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 OR2Y1Q8NGV0 311 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FGFBP3Q8TAT2 258 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 MR1Q95460 341 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ADGRG7Q96K78 797 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SGCZQ96LD1 299 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ALKBH3Q96Q83 286 aaPredicted RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 FOXB1Q99853 325 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 TMEM222Q9H0R3 208 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 RYDENQ9NUL5 291 aaKnown RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 SLC7A11Q9UPY5 501 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 A0A0G2JMM0 328 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ZNF816-ZNF321PA0A0X1KG74 233 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PPB8 328 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PRS3 328 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A10PA6NDY2 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A18PA6NE21 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A16PA6NEW6 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A20PA6NIJ5 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A8PA6NJQ4 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A7PA6NKC0 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A22PA8MWA6 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 KIR3DP1A8MWS1 328 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A12PA8MX19 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A5PA8MXJ8 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A23PA8MXZ1 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 TRDCB7Z8K6 153 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 PRSS44E7EML9 344 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 MPPED1O15442 326 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 PPYP01298 95 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 S100A8P05109 93 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SNRNP70P08621 437 aaKnown RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 MMP7P09237 267 aaPredicted RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A15PP0C7V4 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A13PP0C7W8 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A14PP0C7W9 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 FAM90A24PP0C7X0 464 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SMIM6P0DI80 62 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 EDN3P14138 238 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 MAS1LP35410 378 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 CARD18P57730 90 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 PCBD1P61457 104 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 RND3P61587 244 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SRSF7Q16629 238 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLK1-201ENST00000321356 EIF2S3LQ2VIR3 472 aaKnown RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 HLA-BQ31612 363 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 PLCXD3Q63HM9 321 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 AAED1Q7RTV5 226 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 CALHM1Q8IU99 346 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 OR8G5Q8NG78 346 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 IFI44Q8TCB0 444 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 MALSU1Q96EH3 234 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ABHD14BQ96IU4 210 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 TMEM56Q96MV1 263 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 C1QTNF5Q9BXJ0 243 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 EIF5A2Q9GZV4 153 aaKnown RBP7.51□□□□□ -1.21
CLK1-201ENST00000321356 SLC35B3Q9H1N7 401 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 SMDT1Q9H4I9 107 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 ATPIF1Q9UII2 106 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 TMEM56-RWDD3S4R434 201 aa7.51□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PPH5 198 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 CLEC18AA5D8T8 446 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 LRRC3CA6NJW4 275 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 CCDC85CA6NKD9 419 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 A6NLC8 198 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 C9J4A7 227 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 PITX3O75364 302 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 PRH1P02810 166 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 GNRHRP30968 328 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 PPP1CCP36873 323 aaKnown RBP7.5□□□□□ -1.21
CLK1-201ENST00000321356 GNMTQ14749 295 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 CEACAM16Q2WEN9 425 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 AKIRIN2Q53H80 203 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 IGSF11Q5DX21 431 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 COLCA1Q6ZS62 124 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms