RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MED29Q9NX70 200 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 H0YIG0 161 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 PLPP3O14495 311 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 TNFSF12O43508 249 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 CTSEP14091 401 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 GABRR1P24046 479 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 CSNK1A1P48729 337 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 POLR2HP52434 150 aaKnown RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 SMAD4Q13485 552 aaKnown RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 IQCJQ1A5X6 159 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 CARFQ8N187 725 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF248Q8NDW4 579 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 OR5C1Q8NGR4 320 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 TCFL5Q9UL49 500 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF850A8MQ14 1090 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 TOX3O15405 576 aaPredicted RBP15.73■□□□□ 0.11
SPSB4-201ENST00000310546 OPN1MWP04001 364 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 OPN1MW2P0DN77 364 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 OPN1MW3P0DN78 364 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 FGF5P12034 268 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 RRADP55042 308 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 CLN3Q13286 438 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 RAB35Q15286 201 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 DCAF10Q5QP82 559 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 NAA60Q9H7X0 242 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 MYOTQ9UBF9 498 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 LAMP3Q9UQV4 416 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 SHANK1Q9Y566 2161 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 IGSF23A1L1A6 192 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 DXOO77932 396 aaKnown RBP15.73■□□□□ 0.11
SPSB4-201ENST00000310546 MT-ATP6P00846 226 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 CST2P09228 141 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 SRFP11831 508 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 ANOS1P23352 680 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 OPRM1P35372 400 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 OR3A1P47881 315 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 IDH3GP51553 393 aaPredicted RBP15.73■□□□□ 0.11
SPSB4-201ENST00000310546 ABLIM2Q6H8Q1 611 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 LGI3Q8N145 548 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM37Q8WXS4 190 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 GAL3ST4Q96RP7 486 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 MAGT1Q9H0U3 335 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 CALHM2Q9HA72 323 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 SEMA5BQ9P283 1151 aa15.73■□□□□ 0.11
SPSB4-201ENST00000310546 RPLP1P05386 114 aaKnown RBP15.72■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF43P17038 809 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 HNRNPKP61978 463 aaKnown RBP eCLIP15.72■□□□□ 0.11
SPSB4-201ENST00000310546 FAM90A2PQ658T7 463 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 PRR18Q8N4B5 295 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF283Q8N7M2 679 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 RBMXL1Q96E39 390 aaKnown RBP15.72■□□□□ 0.11
SPSB4-201ENST00000310546 RIMS4Q9H426 269 aaPredicted RBP15.72■□□□□ 0.11
SPSB4-201ENST00000310546 FAM60AQ9NP50 221 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 PLEKHJ1Q9NW61 149 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM242Q9NWH2 141 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 HRASLS2Q9NWW9 162 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF728P0DKX0 622 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 ERVS71-1P61550 626 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 TLE4Q04727 773 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 POLR1DQ9Y2S0 133 aa15.72■□□□□ 0.11
SPSB4-201ENST00000310546 PHF3Q92576 2039 aaKnown RBP15.72■□□□□ 0.11
SPSB4-201ENST00000310546 NPIPA5E9PKD4 350 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 METTL15P1P0C7V9 234 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 ECI1P42126 302 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 VAMP2P63027 116 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 FAM189A2Q15884 450 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 DNM1P34Q6PK57 102 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 NUP54Q7Z3B4 507 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 OR8G5Q8NG78 346 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 OR10S1Q8NGN2 331 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 C11orf40Q8WZ69 217 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM18Q96B42 140 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 EMC6Q9BV81 110 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 NPIPA1Q9UND3 350 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 ASPMQ8IZT6 3477 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 PHF1O43189 567 aaPredicted RBP15.71■□□□□ 0.11
SPSB4-201ENST00000310546 GP1BBP13224 206 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 FUT7Q11130 342 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 PNRC1Q12796 327 aaPredicted RBP15.71■□□□□ 0.11
SPSB4-201ENST00000310546 CHD3Q12873 2000 aaKnown RBP15.71■□□□□ 0.11
SPSB4-201ENST00000310546 FOXF1Q12946 379 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 BATFQ16520 125 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF774Q6NX45 483 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 OR11L1Q8NGX0 322 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 SRD5A3Q9H8P0 318 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 VAX2Q9UIW0 290 aa15.71■□□□□ 0.11
SPSB4-201ENST00000310546 TMED7-TICAM2A0A0A6YYA0 188 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 SERPINE3A8MV23 424 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 SSSCA1O60232 199 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 EPHA1P21709 976 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 ELLP55199 621 aaPredicted RBP15.71■□□□□ 0.1
SPSB4-201ENST00000310546 LIAT1Q6ZQX7 453 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 OR8D2Q9GZM6 311 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 ZNF319Q9P2F9 582 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 V9GYS6 101 aa15.71■□□□□ 0.1
SPSB4-201ENST00000310546 CACNA1EQ15878 2313 aa15.7■□□□□ 0.1
SPSB4-201ENST00000310546 IGKV1-9A0A0C4DH69 117 aa15.7■□□□□ 0.1
SPSB4-201ENST00000310546 NXPH3O95157 252 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms