RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 OR5H1A6NKK0 313 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 GEMIN2O14893 280 aaKnown RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 SURF2Q15527 256 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 FAM210BQ96KR6 192 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 TRAV8-7A0A075B6U6 113 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 PLA2G10O15496 165 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 TNFSF14O43557 240 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 OPN1MWP04001 364 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 OPN1MW2P0DN77 364 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 OPN1MW3P0DN78 364 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 CRHP06850 196 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 S100A4P26447 101 aaKnown RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 RNASEKQ6P5S7 137 aaKnown RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 CXXC4Q9H2H0 198 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 NTMQ9P121 344 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 HPXP02790 462 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 RHOBP62745 196 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 IQCJQ1A5X6 159 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 OR5D13Q8NGL4 314 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 CT55Q8WUE5 264 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 PTPMT1Q8WUK0 201 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 LPAR3Q9UBY5 353 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 SMIM17P0DL12 118 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 IL24Q13007 206 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 ETFRF1Q6IPR1 90 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
PRKCB-201ENST00000303531 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 KIAA1324LA8MWY0 1029 aaPredicted RBP12.29□□□□□ -0.44
PRKCB-201ENST00000303531 TRDCB7Z8K6 153 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
PRKCB-201ENST00000303531 GPA33Q99795 319 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 SLC26A1Q9H2B4 701 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 SPINT1O43278 529 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 RBFOX3A6NFN3 312 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 M0QZ24 198 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 KLF9Q13886 244 aaPredicted RBP12.29□□□□□ -0.44
PRKCB-201ENST00000303531 ASB5Q8WWX0 329 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 LEUTXA8MZ59 168 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 ZNF79Q15937 498 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 WDR74Q6RFH5 385 aaPredicted RBP12.29□□□□□ -0.44
PRKCB-201ENST00000303531 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 DOK5Q9P104 306 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 GABRA1P14867 456 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 P2RY1P47900 373 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 HFEQ30201 348 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
PRKCB-201ENST00000303531 SF3B5Q9BWJ5 86 aaKnown RBP12.29□□□□□ -0.44
PRKCB-201ENST00000303531 TCRBV16S1A1N1A0A5B0 115 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 BCL3P20749 454 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 FNDC7Q5VTL7 733 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 BGLAPP02818 100 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 D2HGDHQ8N465 521 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 IFT22Q9H7X7 185 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 OPN4Q9UHM6 478 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 RNF24Q9Y225 148 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 FCN1O00602 326 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 WISP3O95389 354 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-201ENST00000303531 ATP6V1FQ16864 119 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 SLC25A42Q86VD7 318 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 C1orf210Q8IVY1 113 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 TUSC5Q8IXB3 177 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 OR1A1Q9P1Q5 309 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 hADV38S2A0JD32 116 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 TCAPO15273 167 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 PNLIPP16233 465 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 TMEM108Q6UXF1 575 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 SPNS3Q6ZMD2 512 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 LIPGQ9Y5X9 500 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 TRAV20A0A0B4J274 112 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 PEBP1P30086 187 aaKnown RBP12.28□□□□□ -0.44
PRKCB-201ENST00000303531 OR1L4Q8NGR5 311 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 C1QCP02747 245 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 ISXQ2M1V0 245 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 ATP5SQ99766 215 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 POU2F2P09086 479 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 CST2P09228 141 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 C3AR1Q16581 482 aa12.28□□□□□ -0.44
PRKCB-201ENST00000303531 LANCL1O43813 399 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 IGF2P01344 180 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 BVESQ8NE79 360 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 TCFL5Q9UL49 500 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 SYNGR2O43760 224 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 COX7A1P24310 79 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 RPEL1Q2QD12 228 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 FAM78BQ5VT40 261 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 C10orf35Q96D05 121 aa12.27□□□□□ -0.44
PRKCB-201ENST00000303531 A0A1W2PN81 502 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms