RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 KCNK17Q96T54 332 aa11.06□□□□□ -0.64
SLX4-201ENST00000294008 TMEM191AQ9H0A3 160 aa11.06□□□□□ -0.64
SLX4-201ENST00000294008 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
SLX4-201ENST00000294008 H0YIG0 161 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 THY1P04216 161 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 RPS4Y1P22090 263 aaKnown RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 FCARP24071 287 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 AQP6Q13520 282 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 OTUD1Q5VV17 481 aaPredicted RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 DHRS4L2Q6PKH6 230 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 BPIFA4PQ86YQ2 179 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 OR13F1Q8NGS4 319 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 COL2A1P02458 1487 aaPredicted RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 C9JCJ5 164 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 FUT3P21217 361 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 OR5C1Q8NGR4 320 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 TMED3Q9Y3Q3 217 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 MYH3P11055 1940 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 PREX1Q8TCU6 1659 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 TMEM95Q3KNT9 176 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 RHBDD2Q6NTF9 364 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 DRAXINQ8NBI3 349 aaPredicted RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 R3HDM4Q96D70 268 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 RNF167Q9H6Y7 350 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 A0A0A6YYJ9 748 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 CA2P00918 260 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 SFTPCP11686 197 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 GMPR2Q9P2T1 348 aaKnown RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 SMPD2O60906 423 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 ACER2Q5QJU3 275 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 PAQR6Q6TCH4 344 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 HSPB8Q9UJY1 196 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 HDGFL3Q9Y3E1 203 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 MYO18AQ92614 2054 aaKnown RBP11.05□□□□□ -0.64
SLX4-201ENST00000294008 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 VSIG10L2P0DP72 767 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 STAC2Q6ZMT1 411 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 OVCH2Q7RTZ1 564 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 SLIT2O94813 1529 aa11.05□□□□□ -0.64
SLX4-201ENST00000294008 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 CD1EP15812 388 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 LRRC75BQ2VPJ9 315 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 OR4S2Q8NH73 311 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 CT55Q8WUE5 264 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 AURKAIP1Q9NWT8 199 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 MAGEA5P43359 124 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 SELENOTP62341 195 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 METRNLQ641Q3 311 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 C16orf47Q6ZP98 133 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 PTOV1Q86YD1 416 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 MUC20Q8N307 709 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 FAM157CP0CG43 387 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 ZNF32P17041 273 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 PPICP45877 212 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 TSPAN32Q96QS1 320 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 GLRX2Q9NS18 164 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 MED1Q15648 1581 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 ALPLP05186 524 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 PFN3P60673 137 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 ASCL5Q7RTU5 278 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 SPEM1Q8N4L4 309 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 CA10Q9NS85 328 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 PSORS1C1Q9UIG5 152 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 C3orf85A0A1B0GTC6 90 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 EGR3Q06889 387 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 HLA-DRB5Q30154 266 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 A6NDN8 102 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 PSCAO43653 123 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 ZNF253O75346 499 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 NPPBP16860 134 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 FCGR2BP31994 310 aaPredicted RBP11.04□□□□□ -0.64
SLX4-201ENST00000294008 STARD6P59095 220 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 SSPNQ14714 243 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 EMC4Q5J8M3 183 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 LYG2Q86SG7 212 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 PPP1R1CQ8WVI7 109 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 ZIC5Q96T25 663 aa11.04□□□□□ -0.64
SLX4-201ENST00000294008 HOXD13P35453 343 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
SLX4-201ENST00000294008 NTN1O95631 604 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 CD74P04233 296 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 GABRA1P14867 456 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 TARM1B6A8C7 271 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 WNT9BO14905 357 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 PDE6DO43924 150 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 PTBP1P26599 531 aaKnown RBP eCLIP11.03□□□□□ -0.64
SLX4-201ENST00000294008 CD96P40200 585 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 TMEM183AQ8IXX5 376 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 CHRNA10Q9GZZ6 450 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms