RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PECRQ9BY49 303 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 LOXL2Q9Y4K0 774 aa9.41□□□□□ -0.9
CHRNA1-201ENST00000261007 A0A087X0M5 115 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 A0A1B0GX30 115 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 B4DEV8 164 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 TERTO14746 1132 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 HSD17B6O14756 317 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 SRP19P09132 144 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 CXCL1P09341 107 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 QDPRP09417 244 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 CCL1P22362 96 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 SRD5A2P31213 254 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 PPP1CCP36873 323 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 GLIPR1P48060 266 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 CSNK1A1P48729 337 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 FHITP49789 147 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 UBE2KP61086 200 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 C10orf128Q5T292 105 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 SPNS3Q6ZMD2 512 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 FOXL2NBQ6ZUU3 175 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 SEMA6DQ8NFY4 1073 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 OR51T1Q8NGJ9 327 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 OR51E1Q8TCB6 317 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 RELTQ969Z4 430 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 TVP23CQ96ET8 276 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 RHOVQ96L33 236 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 TM2D1Q9BX74 207 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 KIAA1456Q9P272 454 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 MRPS18CQ9Y3D5 142 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 MMP24Q9Y5R2 645 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 LHFPL6Q9Y693 200 aa9.4□□□□□ -0.9
CHRNA1-201ENST00000261007 NPIPA2E9PIF3 369 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 NPIPA3F8WFD2 350 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 RAMP1O60894 148 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SCGB1D2O95969 90 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 CELA2AP08217 269 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 HCKP08631 526 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 CTSSP25774 331 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 CLDN17P56750 224 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 GAMTQ14353 236 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SSX2Q16385 188 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 RNF144BQ7Z419 303 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 WDFY1Q8IWB7 410 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 OR10S1Q8NGN2 331 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM54Q969K7 222 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 MEGF10Q96KG7 1140 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SUCNR1Q9BXA5 334 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 HIPK2Q9H2X6 1198 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 PROK2Q9HC23 129 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 ST8SIA3O43173 380 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 GDF9O60383 454 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 ZIC3O60481 467 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 HSPB1P04792 205 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SERPINA7P05543 415 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 HPNP05981 417 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SOD3P08294 240 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SERPINA2P20848 420 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 MSR1P21757 451 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 DUSP1P28562 367 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 FOXO1Q12778 655 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM187Q14656 261 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SP5Q6BEB4 398 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 DOK3Q7L591 496 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 PPP1R32Q7Z5V6 425 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 LIN37Q96GY3 246 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 RCC1LQ96I51 464 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 GPER1Q99527 375 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SSX3Q99909 188 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 RARRES2Q99969 163 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF2Q9BSG1 426 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 GPR61Q9BZJ8 451 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 SH3BGRL3Q9H299 93 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 NAA60Q9H7X0 242 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 ZDHHC8Q9ULC8 765 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 TP53TG5Q9Y2B4 290 aa9.39□□□□□ -0.91
CHRNA1-201ENST00000261007 A0A1W2PP11 408 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 M0R296 226 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 C1QL1O75973 258 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 NDUFB7P17568 137 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 DLK1P80370 383 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF266Q14584 549 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF506Q5JVG8 444 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 CARD17Q5XLA6 110 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 SPSB3Q6PJ21 355 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 SLC16A14Q7RTX9 510 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 GALNTL5Q7Z4T8 443 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 ZNF429Q86V71 674 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 TMEM105Q8N8V8 129 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 OR10G4Q8NGN3 311 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 C18orf12Q96KH6 178 aa9.38□□□□□ -0.91
CHRNA1-201ENST00000261007 LURAP1Q96LR2 239 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms