RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 IMPAD1Q9NX62 359 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 UBE2J1Q9Y385 318 aaPredicted RBP16.96■□□□□ 0.31
NEDD8-201ENST00000250495 IGHV2-26A0A0B4J1V2 119 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 IGKV1-9A0A0C4DH69 117 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 SH2D1BO14796 132 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 PSPNO60542 156 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 ISG15P05161 165 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 OCM2P0CE71 109 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 OCMP0CE72 109 aaPredicted RBP16.95■□□□□ 0.3
NEDD8-201ENST00000250495 CD28P10747 220 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 PRKACAP17612 351 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 PDZK1IP1Q13113 114 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 KPRPQ5T749 579 aaPredicted RBP16.95■□□□□ 0.3
NEDD8-201ENST00000250495 FDX2Q6P4F2 183 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 TRAPPC6BQ86SZ2 158 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 RNF166Q96A37 237 aaPredicted RBP16.95■□□□□ 0.3
NEDD8-201ENST00000250495 SPSB1Q96BD6 273 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 FRRS1LQ9P0K9 344 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 IL36RNQ9UBH0 155 aa16.95■□□□□ 0.3
NEDD8-201ENST00000250495 DAPL1A0PJW8 107 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 FUOMA2VDF0 154 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 SAC3D1A6NKF1 404 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 XPNPEP2O43895 674 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 ENTPD6O75354 484 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 ALDOBP05062 364 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 HTR1DP28221 377 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 IL18R1Q13478 541 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 OR52W1Q6IF63 320 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 NDUFA11Q86Y39 141 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 LYG1Q8N1E2 194 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 OR4F17Q8NGA8 305 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 OPALINQ96PE5 141 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 OR4F4Q96R69 305 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 MBOAT4Q96T53 435 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 WNT10AQ9GZT5 417 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 Q9H521 79 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 HMG20AQ9NP66 347 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 RAB26Q9ULW5 256 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 ORC6Q9Y5N6 252 aa16.94■□□□□ 0.3
NEDD8-201ENST00000250495 FAM90A22PA8MWA6 464 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 HTR1AP08908 422 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 CALCBP10092 127 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 CCR9P51686 369 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 GTF2A1P52655 376 aaPredicted RBP16.93■□□□□ 0.3
NEDD8-201ENST00000250495 AQP4P55087 323 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 SNU13P55769 128 aaKnown RBP16.93■□□□□ 0.3
NEDD8-201ENST00000250495 P2RX3P56373 397 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 BLCAPP62952 87 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 SLC25A30Q5SVS4 291 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 MEDAGQ5VYS4 303 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 RTN4RL2Q86UN3 420 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 PACRGLQ8N7B6 248 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 RNFT2Q96EX2 444 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 GAL3ST2Q9H3Q3 398 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 NEK6Q9HC98 313 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 EXOSC4Q9NPD3 245 aaKnown RBP16.93■□□□□ 0.3
NEDD8-201ENST00000250495 HHLA2Q9UM44 414 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 GSTK1Q9Y2Q3 226 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 PCDHGB5Q9Y5G0 923 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 NOTCH3Q9UM47 2321 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 KIAA2026Q5HYC2 2103 aa16.93■□□□□ 0.3
NEDD8-201ENST00000250495 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 SNTNA6NMZ2 147 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 J3QRE1 110 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 SIRPB1O00241 398 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 SLC16A6O15403 523 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 VDAC2P45880 294 aaPredicted RBP16.92■□□□□ 0.3
NEDD8-201ENST00000250495 OR3A1P47881 315 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 LRRC36Q1X8D7 754 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 FBLN7Q53RD9 439 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 REC114Q7Z4M0 266 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 WIPF2Q8TF74 440 aaPredicted RBP16.92■□□□□ 0.3
NEDD8-201ENST00000250495 R3HDM4Q96D70 268 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 HRASLS5Q96KN8 279 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 OR5M11Q96RB7 305 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 MYCBPQ99417 103 aaPredicted RBP16.92■□□□□ 0.3
NEDD8-201ENST00000250495 CITED2Q99967 270 aaPredicted RBP16.92■□□□□ 0.3
NEDD8-201ENST00000250495 RHOFQ9HBH0 211 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 DPM3Q9P2X0 92 aa16.92■□□□□ 0.3
NEDD8-201ENST00000250495 MMP23AO75900 390 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 OR2H2O95918 312 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 MT-ND2P03891 347 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 JUNBP17275 347 aaPredicted RBP16.91■□□□□ 0.3
NEDD8-201ENST00000250495 LMO1P25800 156 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 BRS3P32247 399 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 NANOS3P60323 173 aaKnown RBP16.91■□□□□ 0.3
NEDD8-201ENST00000250495 SNRPGP62308 76 aaKnown RBP16.91■□□□□ 0.3
NEDD8-201ENST00000250495 C16orf82Q7Z2V1 217 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 ABHD12Q8N2K0 398 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 ACBD7Q8N6N7 88 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 OR4P4Q8NGL7 312 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 ZNF596Q8TC21 504 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 CORO2AQ92828 525 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 MRPL48Q96GC5 212 aaKnown RBP16.91■□□□□ 0.3
NEDD8-201ENST00000250495 MMP28Q9H239 520 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 TAS2R3Q9NYW6 316 aa16.91■□□□□ 0.3
NEDD8-201ENST00000250495 J3QLW9 94 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 DENRO43583 198 aaKnown RBP16.9■□□□□ 0.3
NEDD8-201ENST00000250495 KDM4BO94953 1096 aa16.9■□□□□ 0.3
NEDD8-201ENST00000250495 ALPLP05186 524 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms