RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C3orf85A0A1B0GTC6 90 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A10PA6NDY2 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A18PA6NE21 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A16PA6NEW6 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A20PA6NIJ5 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A8PA6NJQ4 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A7PA6NKC0 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A22PA8MWA6 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A12PA8MX19 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A5PA8MXJ8 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A23PA8MXZ1 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 YKT6O15498 198 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A15PP0C7V4 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A13PP0C7W8 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A14PP0C7W9 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM90A24PP0C7X0 464 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 PRSS12P56730 875 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 RHEBQ15382 184 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 SRSF7Q16629 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
SRP54-201ENST00000216774 AKIRIN2Q53H80 203 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 ZNF468Q5VIY5 522 aaPredicted RBP11.49□□□□□ -0.57
SRP54-201ENST00000216774 Q6ZPA2 131 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 ZNF561Q8N587 486 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 Q8NFD4 153 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 TP53RKQ96S44 253 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 TMEM222Q9H0R3 208 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 SLC35B3Q9H1N7 401 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FAM86C1Q9NVL1 165 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 ATPIF1Q9UII2 106 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 CCDC85CA6NKD9 419 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 P04436 131 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 PATE4P0C8F1 98 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FHITP49789 147 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 B2MP61769 119 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
SRP54-201ENST00000216774 NHLH2Q02577 135 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 YRDCQ86U90 279 aaKnown RBP11.49□□□□□ -0.57
SRP54-201ENST00000216774 OR1J1Q8NGS3 322 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 PIGCQ92535 297 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 FSCN3Q9NQT6 498 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 PARPBPQ9NWS1 579 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
SRP54-201ENST00000216774 C5orf52A6NGY3 159 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 TRDCB7Z8K6 153 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 K7N7A8 449 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 EIF3GO75821 320 aaKnown RBP eCLIP11.48□□□□□ -0.57
SRP54-201ENST00000216774 S100A8P05109 93 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 GLI4P10075 376 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 ZNF44P15621 663 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 AGAP20933 346 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 FOLR3P41439 243 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 RGS19P49795 217 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 ZNF266Q14584 549 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 NRN1LQ496H8 165 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 TRIM61Q5EBN2 209 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 OR2C3Q8N628 320 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 HSD17B11Q8NBQ5 300 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 ADGRG7Q96K78 797 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 TMEM56Q96MV1 263 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 SPIN2AQ99865 258 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 SPIN2BQ9BPZ2 258 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 C1QTNF5Q9BXJ0 243 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 PRDM14Q9GZV8 571 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 GPR35Q9HC97 309 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 UMAD1C9J7I0 102 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 PRSS44E7EML9 344 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 M0R036 132 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 UBE2CO00762 179 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 CXCL13O43927 109 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 OR7C1O76099 320 aaPredicted RBP11.48□□□□□ -0.57
SRP54-201ENST00000216774 SNRNP70P08621 437 aaKnown RBP11.48□□□□□ -0.57
SRP54-201ENST00000216774 AKR1C3P42330 323 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 RND3P61587 244 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 SNRPEP62304 92 aaKnown RBP11.48□□□□□ -0.57
SRP54-201ENST00000216774 DAZAP2Q15038 168 aaPredicted RBP11.48□□□□□ -0.57
SRP54-201ENST00000216774 MEX3BQ6ZN04 569 aaKnown RBP11.48□□□□□ -0.57
SRP54-201ENST00000216774 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 ZNF611Q8N823 705 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 NAXEQ8NCW5 288 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 OR8G5Q8NG78 346 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 OR10D3Q8NH80 312 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
SRP54-201ENST00000216774 KCNJ16Q9NPI9 418 aa11.48□□□□□ -0.57
SRP54-201ENST00000216774 RTTNQ86VV8 2226 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 A0A0G2JMM0 328 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 A0A1W2PPB8 328 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 A0A1W2PRS3 328 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 KIR3DP1A8MWS1 328 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 NTN3O00634 580 aaPredicted RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 PITX3O75364 302 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 C1QL1O75973 258 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 IGHEP01854 428 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms