RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 C1QBP02746 253 aa13.25□□□□□ -0.29
LAPTM4A-201ENST00000175091 ACAA1P09110 424 aaPredicted RBP13.25□□□□□ -0.29
LAPTM4A-201ENST00000175091 OR4E1P0C645 316 aa13.25□□□□□ -0.29
LAPTM4A-201ENST00000175091 RPS23P62266 143 aaKnown RBP13.25□□□□□ -0.29
LAPTM4A-201ENST00000175091 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 FAM221AA4D161 298 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 TMEM8BA6NDV4 472 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 SDCBPO00560 298 aaPredicted RBP13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 NOS1APO75052 506 aaPredicted RBP13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 THBDP07204 575 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 SFTPCP11686 197 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 ARPC4P59998 168 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 TSPAN5P62079 268 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 CDK10Q15131 360 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 C4orf46Q504U0 113 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 AADACL3Q5VUY0 350 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 PEG10Q86TG7 708 aaKnown RBP13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 LRP11Q86VZ4 500 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 TMEM17Q86X19 198 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 MUC20Q8N307 709 aaPredicted RBP13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 SPICQ8N5J4 248 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 POC1AQ8NBT0 407 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 MARCH1Q8TCQ1 289 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 HES4Q9HCC6 221 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZNF222Q9UK12 451 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 OSGIN2Q9Y236 505 aa13.24□□□□□ -0.29
LAPTM4A-201ENST00000175091 RELNP78509 3460 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 MED19A0JLT2 244 aaPredicted RBP13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 C3orf80F5H4A9 247 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 NAPSAO96009 420 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 GRPP07492 148 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 FPR2P25090 351 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 DUSP1P28562 367 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 KLF3P57682 345 aaPredicted RBP13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 SLC25A42Q86VD7 318 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 NUP37Q8NFH4 326 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZNF431Q8TF32 576 aaPredicted RBP13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZNF286AQ9HBT8 521 aa13.23□□□□□ -0.29
LAPTM4A-201ENST00000175091 TRAV24A0A0B4J272 114 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 IGHV3-64DA0A0J9YX35 117 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 PTAFRP25105 342 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 DHRS2Q13268 280 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 LY6DQ14210 128 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 GRK1Q15835 563 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 PRAMEF6Q5VXH4 476 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZNF660Q6AZW8 331 aaPredicted RBP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 FAHD2BQ6P2I3 314 aaPredicted RBP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 Q6P435 159 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 Q6ZS49 121 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 SUMF2Q8NBJ7 301 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 GTF3AQ92664 365 aaKnown RBP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 FAHD2AQ96GK7 314 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 CA10Q9NS85 328 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 MGAT4CQ9UBM8 478 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 DUSP13Q9UII6 198 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZSCAN5BA6NJL1 495 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 MCRIP1C9JLW8 97 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 NXPH2O95156 264 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 PTBP3O95758 552 aaKnown RBP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 GLAP06280 429 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 CD200P41217 278 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 GZMKP49863 264 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 ASCL1P50553 236 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZNF146Q15072 292 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 KCNJ8Q15842 424 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 SLC22A25Q6T423 547 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 WDR82Q6UXN9 313 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 WFDC8Q8IUA0 241 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 KDF1Q8NAX2 398 aaPredicted RBP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZNF436Q9C0F3 470 aaPredicted RBP13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 NECAP2Q9NVZ3 263 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 GPR132Q9UNW8 380 aa13.22□□□□□ -0.29
LAPTM4A-201ENST00000175091 OR5H14A6NHG9 310 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 SMLR1H3BR10 107 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 HSPB6O14558 160 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 FABP7O15540 132 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 HLA-AP01891 365 aaKnown RBP13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 PPP3CBP16298 524 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 ZBTB25P24278 435 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 NPY4RP50391 375 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 UBE2MP61081 183 aaKnown RBP13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 MZT1Q08AG7 82 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 SURF2Q15527 256 aaPredicted RBP13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 MPPED2Q15777 294 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 VHLLQ6RSH7 139 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 OR2AK2Q8NG84 335 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 SYT3Q9BQG1 590 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 DPCDQ9BVM2 203 aaPredicted RBP13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 C5orf66Q9H5L9 145 aa13.21□□□□□ -0.29
LAPTM4A-201ENST00000175091 OR5H8P0DN80 308 aa13.2□□□□□ -0.3
LAPTM4A-201ENST00000175091 TAS2R31P59538 309 aa13.2□□□□□ -0.3
LAPTM4A-201ENST00000175091 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
LAPTM4A-201ENST00000175091 PCSK4Q6UW60 755 aa13.2□□□□□ -0.3
LAPTM4A-201ENST00000175091 ZNF826PQ6ZT77 177 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms