RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 DYNC1I2Q13409 638 aaKnown RBP12.73□□□□□ -0.37
ERCC1-201ENST00000013807 IL18R1Q13478 541 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 EDDM3AQ14507 147 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 C1orf146Q5VVC0 180 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 MEDAGQ5VYS4 303 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 OR52W1Q6IF63 320 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 FGGYQ96C11 551 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 CITED2Q99967 270 aaPredicted RBP12.73□□□□□ -0.37
ERCC1-201ENST00000013807 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 MMP28Q9H239 520 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
ERCC1-201ENST00000013807 A0A087X0M5 115 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 IGKV1-12A0A0C4DH73 117 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 A0A1B0GX30 115 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 FUOMA2VDF0 154 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 F2RL2O00254 374 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 SH2D1BO14796 132 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 SLC16A6O15403 523 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 IGKV1D-12P01611 117 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 ALPLP05186 524 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 RPSAP08865 295 aaKnown RBP12.72□□□□□ -0.37
ERCC1-201ENST00000013807 DUSP1P28562 367 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 SLC34A1Q06495 639 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 Q6ZPA2 131 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 ZNF596Q8TC21 504 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 GAL3ST2Q9H3Q3 398 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 RIBC2Q9H4K1 309 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 LIN7BQ9HAP6 207 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 HHLA2Q9UM44 414 aa12.72□□□□□ -0.37
ERCC1-201ENST00000013807 EXOGQ9Y2C4 368 aaKnown RBP12.72□□□□□ -0.37
ERCC1-201ENST00000013807 OR4C45A6NMZ5 311 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 INMTO95050 263 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 OR2H2O95918 312 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 JUNBP17275 347 aaPredicted RBP12.71□□□□□ -0.37
ERCC1-201ENST00000013807 PRKACAP17612 351 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 POU3F4P49335 361 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 ABHD12Q8N2K0 398 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 ACBD7Q8N6N7 88 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 NDNFQ8TB73 568 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 CREB3L1Q96BA8 519 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 PELI1Q96FA3 418 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 NCOR1P1Q9H4R4 102 aa12.71□□□□□ -0.37
ERCC1-201ENST00000013807 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 DAPL1A0PJW8 107 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 LY6LH3BQJ8 138 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 CGB3P0DN86 165 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 CGB7P0DN87 165 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF20P17024 532 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 BRS3P32247 399 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 OXLD1Q5BKU9 147 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 Q6P435 159 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 OR51A4Q8NGJ6 313 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 R3HDM4Q96D70 268 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 EXOSC4Q9NPD3 245 aaKnown RBP12.7□□□□□ -0.38
ERCC1-201ENST00000013807 IMPAD1Q9NX62 359 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.7□□□□□ -0.38
ERCC1-201ENST00000013807 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF281Q9Y2X9 895 aa12.7□□□□□ -0.38
ERCC1-201ENST00000013807 DNAH3Q8TD57 4116 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 LEUTXA8MZ59 168 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 PEX14O75381 377 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 HTR1AP08908 422 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 GABRB1P18505 474 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 CDK2P24941 298 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 VDAC2P45880 294 aaPredicted RBP12.69□□□□□ -0.38
ERCC1-201ENST00000013807 GLIPR1P48060 266 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
ERCC1-201ENST00000013807 PARP16Q8N5Y8 322 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 OR5AU1Q8NGC0 362 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 OR10AC1Q8NH08 325 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 RNFT2Q96EX2 444 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 MYCBPQ99417 103 aaPredicted RBP12.69□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF649Q9BS31 505 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 ZCCHC4Q9H5U6 513 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 NEK6Q9HC98 313 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 NECAP2Q9NVZ3 263 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
ERCC1-201ENST00000013807 ODAMA1E959 279 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 SAC3D1A6NKF1 404 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 SNTNA6NMZ2 147 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 BUB1B-PAK6H3BSN5 160 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 SIRPB1O00241 398 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 OR2F2O95006 317 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 AMY1AP04745 511 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 AMY2AP04746 511 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 ALDH3A2P51648 485 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 ZP1P60852 638 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 PAX5Q02548 391 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms