RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MRPL24Q96A35 216 aaKnown RBP11.12□□□□□ -0.63
PHGDH-221ENST00000641573 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 MRPL37Q9BZE1 423 aaKnown RBP11.12□□□□□ -0.63
PHGDH-221ENST00000641573 ESRP2Q9H6T0 727 aaKnown RBP11.12□□□□□ -0.63
PHGDH-221ENST00000641573 HRASLSQ9HDD0 168 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.12□□□□□ -0.63
PHGDH-221ENST00000641573 CA10Q9NS85 328 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 TAS2R8Q9NYW2 309 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 TAAR3PQ9P1P4 343 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 ST3GAL6Q9Y274 331 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 KCNK7Q9Y2U2 307 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 IGHV3-64DA0A0J9YX35 117 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 NAP1L6A6NFF2 107 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ZSCAN5BA6NJL1 495 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 SSX5O60225 188 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 RHBDL1O75783 438 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 FCER2P06734 321 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 BTCP35070 178 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ACTBP60709 375 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ACTG1P63261 375 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 MZT1Q08AG7 82 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ZNF154Q13106 437 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 SIGIRRQ6IA17 410 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ADAM5Q6NVV9 412 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 GLCCI1Q86VQ1 547 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 OR2Z1Q8NG97 314 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ST8SIA4Q92187 359 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 PLPPR2Q96GM1 343 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 CYYR1Q96J86 154 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 MMP28Q9H239 520 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ZNF442Q9H7R0 627 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 PLEKHJ1Q9NW61 149 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 POLDIP2Q9Y2S7 368 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
PHGDH-221ENST00000641573 PLSCR5A0PG75 271 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A10PA6NDY2 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A18PA6NE21 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A16PA6NEW6 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A20PA6NIJ5 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A8PA6NJQ4 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A7PA6NKC0 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A22PA8MWA6 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A12PA8MX19 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A5PA8MXJ8 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A23PA8MXZ1 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 CDIPTO14735 213 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 CA11O75493 328 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 CD3EP07766 207 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A15PP0C7V4 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A13PP0C7W8 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A14PP0C7W9 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM90A24PP0C7X0 464 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 PRKACAP17612 351 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 CHATP28329 748 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 SLC6A1P30531 599 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 RCVRNP35243 200 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 SNU13P55769 128 aaKnown RBP11.1□□□□□ -0.63
PHGDH-221ENST00000641573 TFF3Q07654 80 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 MAB21L1Q13394 359 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 ARFRP1Q13795 201 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 PDCD1Q15116 288 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 PLA1AQ53H76 456 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 NHLRC3Q5JS37 347 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 PRAMEF6Q5VXH4 476 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 C6orf201Q7Z4U5 140 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 C11orf53Q8IXP5 236 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FAM58AQ8N1B3 248 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 TMEM229BQ8NBD8 167 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 DUSP18Q8NEJ0 188 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 EMG1Q92979 244 aaKnown RBP11.1□□□□□ -0.63
PHGDH-221ENST00000641573 FOXC2Q99958 501 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 DPAGT1Q9H3H5 408 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 PLK3Q9H4B4 646 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 RHOFQ9HBH0 211 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 IFT46Q9NQC8 304 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 NLKQ9UBE8 527 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 ZNF107Q9UII5 783 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-221ENST00000641573 POU2F3Q9UKI9 436 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 ACANP16112 2415 aa11.1□□□□□ -0.63
PHGDH-221ENST00000641573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-221ENST00000641573 TUBAL3A6NHL2 446 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 SERPINE3A8MV23 424 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 PDCD6O75340 191 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 OR4A8P0C604 315 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 AKAIN1P0CW23 69 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 PGA5P0DJD9 388 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 FAUP35544 74 aaKnown RBP11.09□□□□□ -0.63
PHGDH-221ENST00000641573 CD200P41217 278 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 TAS2R19P59542 299 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 NKPD1Q17RQ9 610 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 BEX5Q5H9J7 111 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 GVQW1Q8N7I0 195 aa11.09□□□□□ -0.63
PHGDH-221ENST00000641573 OR4C16Q8NGL9 310 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms