RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 FAM166AQ6J272 317 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 VWA1Q6PCB0 445 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 DPY19L2P2Q6ZN68 376 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 CLEC18CQ8NCF0 446 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 C1orf162Q8NEQ5 155 aaPredicted RBP6.96□□□□□ -1.29
VPS11-209ENST00000622309 FAM71F1Q96KD3 344 aaPredicted RBP6.96□□□□□ -1.29
VPS11-209ENST00000622309 ZNF319Q9P2F9 582 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 KLHDC2Q9Y2U9 406 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 DNAH14Q0VDD8 3507 aa6.96□□□□□ -1.29
VPS11-209ENST00000622309 EYSQ5T1H1 3165 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 IGHV2OR16-5A0A0B4J2B6 119 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 A0A1W2PR48 441 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 ZNF840PA6NDX5 716 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 ETV2O00321 342 aaPredicted RBP6.96□□□□□ -1.3
VPS11-209ENST00000622309 CTSVO60911 334 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 STC2O76061 302 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 C1orf105O95561 183 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 GNB3P16520 340 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 CSNK2A2P19784 350 aaPredicted RBP6.96□□□□□ -1.3
VPS11-209ENST00000622309 GLRA1P23415 457 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 HSD11B1P28845 292 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 DNASE1L1P49184 302 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 TMEM225Q6GV28 225 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 C19orf35Q6ZS72 473 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 MRPL43Q8N983 215 aaKnown RBP6.96□□□□□ -1.3
VPS11-209ENST00000622309 OR5H2Q8NGV7 314 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 OR11L1Q8NGX0 322 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 OR6N2Q8NGY6 317 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 WFDC5Q8TCV5 224 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 LOXL4Q96JB6 756 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 LPAR4Q99677 370 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 AIF1LQ9BQI0 150 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 MAGT1Q9H0U3 335 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 ELL3Q9HB65 397 aaPredicted RBP6.96□□□□□ -1.3
VPS11-209ENST00000622309 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 GNG13Q9P2W3 67 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 ST3GAL6Q9Y274 331 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 WIPI2Q9Y4P8 454 aa6.96□□□□□ -1.3
VPS11-209ENST00000622309 MEGF11A6BM72 1044 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SIVA1O15304 175 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 NDUFS4O43181 175 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 XRCC2O43543 280 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 FGF17O60258 216 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 RHBDL1O75783 438 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ZIC2O95409 532 aaPredicted RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 DDAH2O95865 285 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 CD55P08174 381 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 HOXB2P14652 356 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 IGFBP4P22692 258 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 TPPP2P59282 170 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 MRPL2Q5T653 305 aaKnown RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 C16orf82Q7Z2V1 217 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 DAZAP1Q96EP5 407 aaKnown RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 SLC35A4Q96G79 324 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ZBP1Q9H171 429 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 PLK3Q9H4B4 646 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 Q9N2K0 584 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 TAS2R4Q9NYW5 299 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 OR6C3Q9NZP0 311 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ZNF814B7Z6K7 855 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 PFN1P07737 140 aaKnown RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 ACRP10323 421 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 APOBEC3AP31941 199 aaPredicted RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 ASCL1P50553 236 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 RAB30Q15771 203 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 MYPOPQ86VE0 399 aaPredicted RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 TMEM256Q8N2U0 113 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 LINC01555Q8NAE3 123 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 OR4B1Q8NGF8 309 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 CLDND2Q8NHS1 167 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 CMTM2Q8TAZ6 248 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 CPT1CQ8TCG5 803 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ZPLD1Q8TCW7 415 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 FAM3CQ92520 227 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 RASD2Q96D21 266 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 REEP6Q96HR9 211 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 C4orf45Q96LM5 186 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 EHFQ9NZC4 300 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 PLXNB3Q9ULL4 1909 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 NSG1A0A0A6YYJ2 146 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SYNGR4O95473 234 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 CRYGCP07315 174 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ZNF43P17038 809 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 UCP1P25874 307 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ATP6V0CP27449 155 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 CSNK1A1P48729 337 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SPINT3P49223 89 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 DEFB103AP81534 67 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ZNF266Q14584 549 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 TRIM61Q5EBN2 209 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 WDR38Q5JTN6 314 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 ACTL10Q5JWF8 245 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SPRED2Q7Z698 418 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SLC16A11Q8NCK7 471 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SCAMP4Q969E2 229 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SLC25A44Q96H78 314 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms