RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SSX2Q16385 188 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 AANATQ16613 207 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 NSUN5P1Q3KNT7 163 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 UTF1Q5T230 341 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF626Q68DY1 528 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 Q6ZTK2 550 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 SLC25A26Q70HW3 274 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 GID4Q8IVV7 300 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 OR10H4Q8NGA5 316 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 OR10AC1Q8NH08 325 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 RFT1Q96AA3 541 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 EME1Q96AY2 570 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 ADAT3Q96EY9 351 aaPredicted RBP9.21□□□□□ -0.94
CPNE3-210ENST00000621245 CEP19Q96LK0 163 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 CLUHP3Q96NS8 147 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 OR5M11Q96RB7 305 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 CDCA4Q9BXL8 241 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 CHST5Q9GZS9 411 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
CPNE3-210ENST00000621245 RIBC2Q9H4K1 309 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 RANBP3Q9H6Z4 567 aaPredicted RBP9.21□□□□□ -0.94
CPNE3-210ENST00000621245 HEXA-AS1Q9H8Q6 139 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 TCF19Q9Y242 345 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 METTL15A6NJ78 407 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 SAC3D1A6NKF1 404 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 DHRS7CA6NNS2 312 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 VGLL3A8MV65 326 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 SHOXO15266 292 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 SYT7O43581 403 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 PSPNO60542 156 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OPN1MWP04001 364 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 KRT8P05787 483 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF728P0DKX0 622 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OPN1MW2P0DN77 364 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OPN1MW3P0DN78 364 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 IGHV1-8P0DP01 117 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 HOXB6P17509 224 aaKnown RBP9.2□□□□□ -0.94
CPNE3-210ENST00000621245 GDNFP39905 211 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 NANOS3P60323 173 aaKnown RBP9.2□□□□□ -0.94
CPNE3-210ENST00000621245 BNIP1Q12981 228 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 FDX2Q6P4F2 183 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OR8H2Q8N162 312 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OR4S1Q8NGB4 309 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OR2T6Q8NHC8 308 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 EMG1Q92979 244 aaKnown RBP9.2□□□□□ -0.94
CPNE3-210ENST00000621245 MNTQ99583 582 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 GABARAPL3Q9BY60 117 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 PRRG3Q9BZD7 231 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 FAM234AQ9H0X4 552 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 MMP28Q9H239 520 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 PLEKHA1Q9HB21 404 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 H2AFY2Q9P0M6 372 aaPredicted RBP9.2□□□□□ -0.94
CPNE3-210ENST00000621245 AASSQ9UDR5 926 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 OAZ3Q9UMX2 235 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 HILPDAQ9Y5L2 63 aa9.2□□□□□ -0.94
CPNE3-210ENST00000621245 IGKV1-12A0A0C4DH73 117 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 FAM172BPA6NC97 362 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ENTPD6O75354 484 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 HAND1O96004 215 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 IGKV1D-12P01611 117 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 CD24P25063 80 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 FASP25445 335 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 OR3A1P47881 315 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 LGALS4P56470 323 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ACTA2P62736 377 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 BLCAPP62952 87 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ACTG2P63267 376 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ACTC1P68032 377 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ACTA1P68133 377 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF91Q05481 1191 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 DYNC1I2Q13409 638 aaKnown RBP9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ANKRD39Q53RE8 183 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 KPRPQ5T749 579 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-210ENST00000621245 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 Q6ZPA2 131 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ZDHHC13Q8IUH4 622 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 Q8N2B8 174 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 OR11H6Q8NGC7 330 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 OR51A4Q8NGJ6 313 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ITFG2Q969R8 447 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 ZNF714Q96N38 554 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 SPACA5Q96QH8 159 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-210ENST00000621245 NPFFR1Q9GZQ6 430 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 WARS2Q9UGM6 360 aaKnown RBP9.19□□□□□ -0.94
CPNE3-210ENST00000621245 GNG8Q9UK08 70 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 AP4S1Q9Y587 144 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
CPNE3-210ENST00000621245 NBEAL2Q6ZNJ1 2754 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 IGHV2-26A0A0B4J1V2 119 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 A0A1W2PPH5 198 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 SH2D7A6NKC9 451 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-210ENST00000621245 J3QRE1 110 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 SIRPB1O00241 398 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 CHRM2P08172 466 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 OR2T7P0C7T2 308 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 GABRR1P24046 479 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 POU3F4P49335 361 aa9.18□□□□□ -0.94
CPNE3-210ENST00000621245 FUT6P51993 359 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms