RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 VWA1Q6PCB0 445 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 MRGPRGQ86SM5 289 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 ATOH1Q92858 354 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 MRPL24Q96A35 216 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 LRFN3Q9BTN0 628 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 TMEM191AQ9H0A3 160 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 SOX15O60248 233 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 CIDEAO60543 219 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 CDS2O95674 445 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 HLA-DRB5Q30154 266 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 TMEM215Q68D42 235 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 ABLIM2Q6H8Q1 611 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 CBLN3Q6UW01 205 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 VN1R4Q7Z5H5 301 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 MCHR2Q969V1 340 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 STARD4Q96DR4 205 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 ANGPTL4Q9BY76 406 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 FLRT3Q9NZU0 649 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 ZFC3H1O60293 1989 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 CHST1O43916 411 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 MPZL1O95297 269 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 RPL11P62913 178 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 MICBQ29980 383 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 UBALD1Q8TB05 177 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 ZNF552Q9H707 407 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 KLF13Q9Y2Y9 288 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 MUC1P15941 1255 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 VEGFBP49765 207 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 TSPO2Q5TGU0 170 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 RGS7BPQ6MZT1 257 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 ZNF880Q6PDB4 577 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 LILRB1Q8NHL6 650 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 GPA33Q99795 319 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 TWSG1Q9GZX9 223 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 SLC2A9Q9NRM0 540 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 TAF1P21675 1872 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 A0A1W2PPC4 97 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 SHISA8B8ZZ34 492 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 EWSR1Q01844 656 aaKnown RBP eCLIP9.45□□□□□ -0.91e-9■■■■■ 35.7
CLTCL1-209ENST00000617103 PRSS41Q7RTY9 318 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 OR10AC1Q8NH08 325 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 C11orf94C9JXX5 98 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 ST8SIA5O15466 376 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 WISP3O95389 354 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 VSIG10L2P0DP72 767 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.95e-12■■■■■ 52.1
CLTCL1-209ENST00000617103 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 MESTQ5EB52 335 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 TMEM196Q5HYL7 178 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 DCAF12L2Q5VW00 463 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 ZNF547Q8IVP9 402 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 CPEB3Q8NE35 698 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 OR11G2Q8NGC1 345 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 ASB5Q8WWX0 329 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 KIAA1456Q9P272 454 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 ST6GALNAC2Q9UJ37 374 aa9.45□□□□□ -0.9
CLTCL1-209ENST00000617103 NTN1O95631 604 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 TMIGD3P0DMS9 266 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 NAT2P11245 290 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 HTR1DP28221 377 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 RPL24P83731 157 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 TBC1D26Q86UD7 250 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 RGP1Q92546 391 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 DNAJC13O75165 2243 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 KIAA0100Q14667 2235 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 CT62P0C5K7 136 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 ANKRD34CP0C6C1 535 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 MDH2P40926 338 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 SULT1A2P50226 295 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 HIST3H3Q16695 136 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 ZNF362Q5T0B9 420 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 TMEM230Q96A57 120 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 ICAM5Q9UMF0 924 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 M0R2Z0 102 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 CD1AP06126 327 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 CAMPP49913 170 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 C6orf15Q6UXA7 325 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 OR8B12Q8NGG6 310 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 FBXO17Q96EF6 278 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 SLC52A3Q9NQ40 469 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 RREB1Q92766 1687 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 TRGV10A0A0A0MS01 117 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 SPTY2D1-AS1A0A0U1RR47 76 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 FCGR3BO75015 233 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 RPS4Y1P22090 263 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 RPS4XP62701 263 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 Q1RN00 199 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 TMEM56Q96MV1 263 aa9.44□□□□□ -0.9
CLTCL1-209ENST00000617103 SH2D2AQ9NP31 389 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms