RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OR13G1Q8NGZ3 307 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 PLK3Q9H4B4 646 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 FZR1Q9UM11 496 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 ANAPC10Q9UM13 185 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 PLEKHA6Q9Y2H5 1048 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 DIDO1Q9BTC0 2240 aaKnown RBP7.58□□□□□ -1.2
CCDC47-207ENST00000612558 ICE1Q9Y2F5 2266 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 A0A1B0GWJ7 208 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 DISC1C4P0D8 188 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 H0YL77 283 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 MLNRO43193 412 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 PDCD6O75340 191 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 NDUFB6O95139 128 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 FUT3P21217 361 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 PMELP40967 661 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 RAB25P57735 213 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 MZT1Q08AG7 82 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF154Q13106 437 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 RBMS2Q15434 407 aaKnown RBP7.58□□□□□ -1.2
CCDC47-207ENST00000612558 RNASE10Q5GAN6 216 aaKnown RBP7.58□□□□□ -1.2
CCDC47-207ENST00000612558 WDR86Q86TI4 376 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 LINC00596Q86U02 117 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 HOGA1Q86XE5 327 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 Q8IYB0 196 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 SCCPDHQ8NBX0 429 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 OR10AD1Q8NGE0 317 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 OR51S1Q8NGJ8 323 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 FBXW5Q969U6 566 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 RADILQ96JH8 1075 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 FAAP24Q9BTP7 215 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 TINAGL1Q9GZM7 467 aaPredicted RBP7.58□□□□□ -1.2
CCDC47-207ENST00000612558 C20orf85Q9H1P6 137 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 CXXC4Q9H2H0 198 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 NGBQ9NPG2 151 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 COQ3Q9NZJ6 369 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 DUSP13Q9UII6 198 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 SCP2D1Q9UJQ7 156 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 POLDIP2Q9Y2S7 368 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 ALG5Q9Y673 324 aa7.58□□□□□ -1.2
CCDC47-207ENST00000612558 HMX3A6NHT5 357 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 ATP6V1G2-DDX39BF2Z307 99 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 F8VVB4 439 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 F8VWA3 439 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 F8W735 103 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 M0QYG6 137 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 PEX14O75381 377 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 RHBDL1O75783 438 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 OR7C1O76099 320 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 AMY2AP04746 511 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 THBDP07204 575 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 HNRNPCP07910 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 ACAA1P09110 424 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF735P0CB33 412 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 KLF3P57682 345 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 SELENOVP59797 346 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 MRPS15P82914 257 aaKnown RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 MPV17LQ2QL34 196 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 FBXL19-AS1Q494R0 122 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 ACTBL2Q562R1 376 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 OR52W1Q6IF63 320 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 Q6ZR03 302 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 AKAP14Q86UN6 197 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 FAM58AQ8N1B3 248 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 BATF2Q8N1L9 274 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 BPIFB2Q8N4F0 458 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 NUP37Q8NFH4 326 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 OR4K15Q8NH41 348 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 LILRB4Q8NHJ6 448 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 TMEM171Q8WVE6 324 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 EMG1Q92979 244 aaKnown RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 PRRT1Q99946 306 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 SLC25A21Q9BQT8 299 aaPredicted RBP7.57□□□□□ -1.2
CCDC47-207ENST00000612558 SULT4A1Q9BR01 284 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 GINS4Q9BRT9 223 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 ST6GALNAC5Q9BVH7 336 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 MSL2Q9HCI7 577 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 SLC2A8Q9NY64 477 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 AK3Q9UIJ7 227 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 POU2F3Q9UKI9 436 aa7.57□□□□□ -1.2
CCDC47-207ENST00000612558 IGLV3-9A0A075B6K5 115 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 DPRXA6NFQ7 191 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 F5H5P2 479 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 CDIPTO14735 213 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ARPC1BO15143 372 aaKnown RBP7.56□□□□□ -1.2
CCDC47-207ENST00000612558 PRAF2O60831 178 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 IFNA6P05013 189 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 GRPP07492 148 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 PGA5P0DJD9 388 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 PRKACAP17612 351 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 DTYMKP23919 212 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 HRH1P35367 487 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 MECP2P51608 486 aaKnown RBP7.56□□□□□ -1.2
CCDC47-207ENST00000612558 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 MAB21L1Q13394 359 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 IL13RA2Q14627 380 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms