RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 LMLNQ96KR4 655 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 IL17FQ96PD4 163 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TECTBQ96PL2 329 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 GAL3ST4Q96RP7 486 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 LPAR4Q99677 370 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 RARRES2Q99969 163 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAAP24Q9BTP7 215 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CABLES2Q9BTV7 478 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TPSD1Q9BZJ3 242 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 WFDC1Q9HC57 220 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 Q9N2K0 584 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 MKKSQ9NPJ1 570 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SERINC1Q9NRX5 453 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM106BQ9NUM4 274 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR6C3Q9NZP0 311 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FOXJ2Q9P0K8 574 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 CKLFQ9UBR5 152 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 FUT9Q9Y231 359 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 HS3ST2Q9Y278 367 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 B3GALT5Q9Y2C3 310 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPS16Q9Y3D3 137 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPS18BQ9Y676 258 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 COLEC10Q9Y6Z7 277 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 DOCK8Q8NF50 2099 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRPM6Q9BX84 2022 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 SCN3AQ9NY46 2000 aa3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 TCF20Q9UGU0 1960 aaKnown RBP3.54□□□□□ -1.84
HMGB1P50-201ENST00000605814 COL4A2P08572 1712 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 POLR2AP24928 1970 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRAV27A0A087WT01 109 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CENPVL1A0A0U1RR11 272 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A1B0GWA3 101 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 C17orf102A2RUQ5 167 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 MAP1LC3B2A6NCE7 125 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM202A6NGA9 273 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 SOX15O60248 233 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TBL1XO60907 577 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 MTX2O75431 263 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 SRSF10O75494 262 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 NDUFB8O95169 186 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRH1P02810 166 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 THEGLP0DJG4 465 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CD99P14209 185 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 HIST1H1TP22492 207 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 DTYMKP23919 212 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 AK4P27144 223 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 PSMB5P28074 263 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 PPP1CCP36873 323 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 RBMXP38159 391 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ADCYAP1R1P41586 468 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CDKN2AP42771 156 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 RPL29P47914 159 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF41P51814 821 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ELLP55199 621 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLDN6P56747 220 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TAS2R46P59540 309 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CSNK1G2P78368 415 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CCL20P78556 96 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 MFGE8Q08431 387 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ENPP2Q13822 863 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 PSG3Q16557 428 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 IAH1Q2TAA2 248 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM95Q3KNT9 176 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 PDZD11Q5EBL8 140 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 LRRC73Q5JTD7 316 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 WDR38Q5JTN6 314 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ACTL10Q5JWF8 245 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPL2Q5T653 305 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 FHL5Q5TD97 284 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 C1orf189Q5VU69 101 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC8B1Q6J4K2 584 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ABHD17CQ6PCB6 329 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM184AQ6ZMB5 413 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF66Q6ZN08 573 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 RFLNAQ6ZTI6 216 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CXorf67Q86X51 503 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CACUL1Q86Y37 369 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 WDFY1Q8IWB7 410 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 FBXL14Q8N1E6 418 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM89BQ8N5H3 189 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM156Q8N614 296 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 CDRT4Q8N9R6 151 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC38A9Q8NBW4 561 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 BHLHE23Q8NDY6 225 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR13C9Q8NGT0 318 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2I1PQ8NGU4 316 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR6N2Q8NGY6 317 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2L2Q8NH16 312 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR5B3Q8NH48 314 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 OTOSQ8NHW6 89 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 FNDC9Q8TBE3 224 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZCCHC10Q8TBK6 192 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPL24Q96A35 216 aaKnown RBP3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 RASD2Q96D21 266 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 SMIM12Q96EX1 92 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 SNX22Q96L94 193 aa3.53□□□□□ -1.84
HMGB1P50-201ENST00000605814 LRRC3BQ96PB8 259 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms