RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 NKX6-1P78426 367 aaPredicted RBP17.1■□□□□ 0.33
PNKP-214ENST00000600573 TAF9Q16594 264 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 MICBQ29980 383 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 MPV17LQ2QL34 196 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 ATPAF1Q5TC12 328 aaPredicted RBP17.1■□□□□ 0.33
PNKP-214ENST00000600573 HAGHLQ6PII5 290 aaPredicted RBP17.1■□□□□ 0.33
PNKP-214ENST00000600573 C6orf201Q7Z4U5 140 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 ARRDC1Q8N5I2 433 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 ZNF436Q9C0F3 470 aaPredicted RBP17.1■□□□□ 0.33
PNKP-214ENST00000600573 CXXC4Q9H2H0 198 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 MGAT4CQ9UBM8 478 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 OSGIN2Q9Y236 505 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 NPTNQ9Y639 398 aa17.1■□□□□ 0.33
PNKP-214ENST00000600573 ATMQ13315 3056 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 CHD8Q9HCK8 2581 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 FABP6P51161 128 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 C4orf46Q504U0 113 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 SIGIRRQ6IA17 410 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 NUP37Q8NFH4 326 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 CAPSLQ8WWF8 208 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 SPACA1Q9HBV2 294 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 PAIP2BQ9ULR5 123 aaKnown RBP17.09■□□□□ 0.33
PNKP-214ENST00000600573 EDARQ9UNE0 448 aa17.09■□□□□ 0.33
PNKP-214ENST00000600573 BOD1L1Q8NFC6 3051 aa17.08■□□□□ 0.33
PNKP-214ENST00000600573 FABP7O15540 132 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 IGHV3-13P01766 116 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 FUT3P21217 361 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 CCKARP32238 428 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 LY6DQ14210 128 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 PIGYQ3MUY2 71 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 TMED4Q7Z7H5 227 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 OR52B4Q8NGK2 314 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 ZNF431Q8TF32 576 aaPredicted RBP17.08■□□□□ 0.32
PNKP-214ENST00000600573 SLAMF9Q96A28 289 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 HYLS1Q96M11 299 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 CHST6Q9GZX3 395 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 RANBP3Q9H6Z4 567 aaPredicted RBP17.08■□□□□ 0.32
PNKP-214ENST00000600573 MTCH1Q9NZJ7 389 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 ZZEF1O43149 2961 aa17.08■□□□□ 0.32
PNKP-214ENST00000600573 PDCD6O75340 191 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 GLAP06280 429 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 DTYMKP23919 212 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 SNU13P55769 128 aaKnown RBP17.07■□□□□ 0.32
PNKP-214ENST00000600573 IL13RA2Q14627 380 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 TMEM17Q86X19 198 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 ZFAND1Q8TCF1 268 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 ST6GALNAC5Q9BVH7 336 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 ZNF701Q9NV72 531 aaPredicted RBP17.07■□□□□ 0.32
PNKP-214ENST00000600573 VSIG4Q9Y279 399 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 SPENQ96T58 3664 aaKnown RBP17.07■□□□□ 0.32
PNKP-214ENST00000600573 VSTM5A8MXK1 200 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 SMLR1H3BR10 107 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 GEMIN2O14893 280 aaKnown RBP17.07■□□□□ 0.32
PNKP-214ENST00000600573 BCL3P20749 454 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 OR3A3P47888 321 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 NCCRP1Q6ZVX7 275 aaPredicted RBP17.07■□□□□ 0.32
PNKP-214ENST00000600573 DLL4Q9NR61 685 aa17.07■□□□□ 0.32
PNKP-214ENST00000600573 ZGRF1Q86YA3 2104 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 PIEZO2Q9H5I5 2752 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 NOS1APO75052 506 aaPredicted RBP17.06■□□□□ 0.32
PNKP-214ENST00000600573 GIPP09681 153 aaPredicted RBP17.06■□□□□ 0.32
PNKP-214ENST00000600573 OR4E1P0C645 316 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 NPBWR2P48146 333 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 KLF3P57682 345 aaPredicted RBP17.06■□□□□ 0.32
PNKP-214ENST00000600573 CDK10Q15131 360 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 ALKBH6Q3KRA9 238 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 ALKBH2Q6NS38 261 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 OR10AD1Q8NGE0 317 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 LILRB4Q8NHJ6 448 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 CYYR1Q96J86 154 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 CMSS1Q9BQ75 279 aaKnown RBP17.06■□□□□ 0.32
PNKP-214ENST00000600573 AK3Q9UIJ7 227 aa17.06■□□□□ 0.32
PNKP-214ENST00000600573 IGLV3-9A0A075B6K5 115 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 OR2AT4A6NND4 320 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 TAS2R31P59538 309 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 CHRFAM7AQ494W8 412 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 NLRC3Q7RTR2 1065 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 SLC25A42Q86VD7 318 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 FAM58AQ8N1B3 248 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 MUC20Q8N307 709 aaPredicted RBP17.05■□□□□ 0.32
PNKP-214ENST00000600573 SCCPDHQ8NBX0 429 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 RNASE6Q93091 150 aaKnown RBP17.05■□□□□ 0.32
PNKP-214ENST00000600573 MRGPRFQ96AM1 343 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 SULT4A1Q9BR01 284 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 FAAP24Q9BTP7 215 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 IFT22Q9H7X7 185 aa17.05■□□□□ 0.32
PNKP-214ENST00000600573 FAM172BPA6NC97 362 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 SYNGR1O43759 233 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 FAHD2BQ6P2I3 314 aaPredicted RBP17.04■□□□□ 0.32
PNKP-214ENST00000600573 OR2AK2Q8NG84 335 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 OR5AP2Q8NGF4 316 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 TERB2Q8NHR7 220 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 TMEM171Q8WVE6 324 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 FAHD2AQ96GK7 314 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 RADILQ96JH8 1075 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 SCGB3A2Q96PL1 93 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 TLNRD1Q9H1K6 362 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 PPA2Q9H2U2 334 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 EHFQ9NZC4 300 aa17.04■□□□□ 0.32
PNKP-214ENST00000600573 NDRG3Q9UGV2 375 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms