RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 SF3B5Q9BWJ5 86 aaKnown RBP10□□□□□ -0.81
ARHGEF1-220ENST00000600274 GPR132Q9UNW8 380 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 V9GYS6 101 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 ESPL1Q14674 2120 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 IGKV1-12A0A0C4DH73 117 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 MSGN1A6NI15 193 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 DIRAS3O95661 229 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 IGKV1D-12P01611 117 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
ARHGEF1-220ENST00000600274 FGF2P09038 288 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 CST2P09228 141 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 CD59P13987 128 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 RPA2P15927 270 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PPT1P50897 306 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 B2MP61769 119 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 FAM3AP98173 230 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PLEKHN1Q494U1 663 aaPredicted RBP10□□□□□ -0.81
ARHGEF1-220ENST00000600274 ACOT7LQ6ZUV0 252 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 ARRDC1Q8N5I2 433 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 APH1AQ96BI3 265 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 IFT22Q9H7X7 185 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 RPS10P5Q9NQ39 176 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 CRIM1Q9NZV1 1036 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 TPRP12270 2363 aaKnown RBP10□□□□□ -0.81
ARHGEF1-220ENST00000600274 CEP295Q9C0D2 2601 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 A0A0D9SG52 128 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 RNF222A6NCQ9 220 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRH1P02810 166 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 CRHP06850 196 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 FCGR2CP31995 323 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 TAS2R31P59538 309 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PCBD1P61457 104 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF616Q08AN1 781 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 TSC22D1Q15714 1073 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 OSR2Q8N2R0 312 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 SUMF1Q8NBK3 374 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 EMG1Q92979 244 aaKnown RBP10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRSS50Q9UI38 385 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 TNFSF18Q9UNG2 199 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRELID3BQ9Y3B1 194 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 TRAV39A0A0B4J263 110 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 SPAARA0A1B0GVQ0 90 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR6C6A6NF89 314 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 A8MXK9 166 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 DNASE2O00115 360 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 CDX4O14627 284 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 XRCC2O43543 280 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 MPGP29372 298 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 PIGPP57054 158 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 FAM189A2Q15884 450 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 AADACL3Q5VUY0 350 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 NUFIP2Q7Z417 695 aaKnown RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 SGPP2Q8IWX5 399 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR10AD1Q8NGE0 317 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR11L1Q8NGX0 322 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 CD300LFQ8TDQ1 290 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF703Q9H7S9 590 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 SLC2A8Q9NY64 477 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF175Q9Y473 711 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 HS3ST1O14792 307 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 SFT2D2O95562 160 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 DAOP14920 347 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 CRYGSP22914 178 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 CD80P33681 288 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 SRSF3P84103 164 aaKnown RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 PNLIPRP3Q17RR3 467 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 JMJD6Q6NYC1 403 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 OVCH2Q7RTZ1 564 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 P4HA3Q7Z4N8 544 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 HSD17B13Q7Z5P4 300 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 ARL11Q969Q4 196 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 RRNAD1Q96FB5 475 aaKnown RBP9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 HIST1H2AAQ96QV6 131 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 POLEQ07864 2286 aa9.99□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF503-AS2A6NEH8 195 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 SERPINE3A8MV23 424 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ABCD4O14678 606 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 FPR2P25090 351 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 PTGER4P35408 488 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ASCL1P50553 236 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 SNRPEP62304 92 aaKnown RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 PLP2Q04941 152 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 MALLQ13021 153 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 C9orf152Q5JTZ5 239 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 RPUSD3Q6P087 351 aaKnown RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 CRIP3Q6Q6R5 217 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 C17orf78Q8N4C9 275 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR6K3Q8NGY3 331 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 SECTM1Q8WVN6 248 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 RDH5Q92781 318 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 MARS2Q96GW9 593 aaKnown RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 SCGB3A2Q96PL1 93 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 CUL9Q8IWT3 2517 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 H0YIZ8 118 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 BCL2L11O43521 198 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 MED6O75586 246 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 CYC1P08574 325 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 GFRA1P56159 465 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms