RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 DHRS7CA6NNS2 312 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 VGLL3A8MV65 326 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 J3QT63 122 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 PAX4O43316 350 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 SULT1C4O75897 302 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 CSF1P09603 554 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 PGA5P0DJD9 388 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 MPZP25189 248 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 KIR3DL2P43630 455 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 RPL31P62899 125 aaKnown RBP8.44□□□□□ -1.06
VPS4B-207ENST00000591519 LRRC75BQ2VPJ9 315 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 SMIM21Q3B7S5 101 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF684Q5T5D7 378 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 PLCXD3Q63HM9 321 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF573Q86YE8 665 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 ELMOD2Q8IZ81 293 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 RDH10Q8IZV5 341 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 C8orf59Q8N0T1 100 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-207ENST00000591519 FAM185AQ8N0U4 392 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 PRSS35Q8N3Z0 413 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 SETD9Q8NE22 299 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 TMEM185AQ8NFB2 350 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 FAM110DQ8TAY7 271 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-207ENST00000591519 NRIP2Q9BQI9 281 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 CDCA4Q9BXL8 241 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 MOB1AQ9H8S9 216 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 ISG20L2Q9H9L3 353 aaKnown RBP8.44□□□□□ -1.06
VPS4B-207ENST00000591519 HES4Q9HCC6 221 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 RAB18Q9NP72 206 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 GPR173Q9NS66 373 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 POLDIP2Q9Y2S7 368 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 V9GYS6 101 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 TET2Q6N021 2002 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-207ENST00000591519 A0A1B0GTI1 187 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 LOC107986453A0A1B0GWG9 222 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 J3QRE1 110 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 SLC1A7O00341 560 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 SYT7O43581 403 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 SYNGR1O43759 233 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 ANGPTL7O43827 346 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 XPNPEP2O43895 674 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 FADS2O95864 444 aaKnown RBP8.43□□□□□ -1.06
VPS4B-207ENST00000591519 OPN1MWP04001 364 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 HTR1AP08908 422 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 OPN1MW2P0DN77 364 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 OPN1MW3P0DN78 364 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 HAAOP46952 286 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 ERVK11-1P61568 191 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 RAB40BQ12829 278 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 KLHL22Q53GT1 634 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 CLVS2Q5SYC1 327 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 KPRPQ5T749 579 aaPredicted RBP8.43□□□□□ -1.06
VPS4B-207ENST00000591519 Q6ZTK2 550 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 OR14K1Q8NGZ2 314 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 MRPL48Q96GC5 212 aaKnown RBP8.43□□□□□ -1.06
VPS4B-207ENST00000591519 PLEKHA1Q9HB21 404 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 SEBOXQ9HB31 216 aaPredicted RBP8.43□□□□□ -1.06
VPS4B-207ENST00000591519 ERVK13-1Q9NX77 482 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 SIGLEC9Q9Y336 463 aa8.43□□□□□ -1.06
VPS4B-207ENST00000591519 C17orf98A8MV24 154 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 K7N7A8 449 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 RBP4P02753 201 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 TK1P04183 234 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 ETV1P50549 477 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 GP2P55259 537 aaKnown RBP8.42□□□□□ -1.06
VPS4B-207ENST00000591519 DLX6P56179 175 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 NANOS3P60323 173 aaKnown RBP8.42□□□□□ -1.06
VPS4B-207ENST00000591519 ERVFRD-1P60508 538 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 ISL1P61371 349 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 ACTA2P62736 377 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 ACTG2P63267 376 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 IL24Q13007 206 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 IL18R1Q13478 541 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 GALEQ14376 348 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 BATF2Q8N1L9 274 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 Q8N2B8 174 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 BPIFB6Q8NFQ5 453 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 OR4C13Q8NGP0 309 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 OR2G2Q8NGZ5 317 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 TRMT10AQ8TBZ6 339 aaKnown RBP8.42□□□□□ -1.06
VPS4B-207ENST00000591519 GGHQ92820 318 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 MALSU1Q96EH3 234 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 PELI1Q96FA3 418 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF488Q96MN9 340 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 PKIBQ9C010 78 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 NPFFR1Q9GZQ6 430 aa8.42□□□□□ -1.06
VPS4B-207ENST00000591519 PRKDCP78527 4128 aaKnown RBP8.42□□□□□ -1.06
VPS4B-207ENST00000591519 PLXNB1O43157 2135 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 E9PI62 339 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 INMTO95050 263 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 NXPH2O95156 264 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 ATP6V1G2O95670 118 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 LIMS3P0CW19 117 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 LIMS4P0CW20 117 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 CCL3L1P16619 93 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 CCL1P22362 96 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 CAPZA1P52907 286 aa8.41□□□□□ -1.06
VPS4B-207ENST00000591519 GBX2P52951 348 aaPredicted RBP8.41□□□□□ -1.06
VPS4B-207ENST00000591519 LGALS4P56470 323 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms