RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 BMXP51813 675 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 ST3GAL4Q11206 333 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
SS18-222ENST00000582792 RBM48Q5RL73 367 aaKnown RBP10.98□□□□□ -0.65
SS18-222ENST00000582792 VAX1Q5SQQ9 334 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 TMPRSS11AQ6ZMR5 421 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 LHFPL3Q86UP9 236 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 CATSPERDQ86XM0 798 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 ELMOD2Q8IZ81 293 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 Q8N2B8 174 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 TMEM185AQ8NFB2 350 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 OR52N1Q8NH53 320 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 WIPF2Q8TF74 440 aaPredicted RBP10.98□□□□□ -0.65
SS18-222ENST00000582792 PIGCQ92535 297 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 YTHDF1Q9BYJ9 559 aaKnown RBP10.98□□□□□ -0.65
SS18-222ENST00000582792 TTTY10Q9BZA0 68 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 HEXA-AS1Q9H8Q6 139 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 CHCHD3Q9NX63 227 aaKnown RBP10.98□□□□□ -0.65
SS18-222ENST00000582792 GNG8Q9UK08 70 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 OR52A1Q9UKL2 312 aa10.98□□□□□ -0.65
SS18-222ENST00000582792 DHRS7CA6NNS2 312 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 VGLL3A8MV65 326 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 MAGEB4O15481 346 aaPredicted RBP10.97□□□□□ -0.65
SS18-222ENST00000582792 RHBDL1O75783 438 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 OR12D2P58182 307 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 TP53I3Q53FA7 332 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 BCL2L15Q5TBC7 163 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 ZBTB37Q5TC79 503 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 FOXB2Q5VYV0 432 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 ZDHHC23Q8IYP9 409 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 STX19Q8N4C7 294 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 C11orf42Q8N5U0 333 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 MYDGFQ969H8 173 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 RNF166Q96A37 237 aaPredicted RBP10.97□□□□□ -0.65
SS18-222ENST00000582792 SDSLQ96GA7 329 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 LYZL4Q96KX0 146 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 C4orf36Q96KX1 117 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 CITED2Q99967 270 aaPredicted RBP10.97□□□□□ -0.65
SS18-222ENST00000582792 DUSP21Q9H596 190 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.97□□□□□ -0.65
SS18-222ENST00000582792 C19orf12Q9NSK7 152 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 BLOC1S6Q9UL45 172 aa10.97□□□□□ -0.65
SS18-222ENST00000582792 J3QLW9 94 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 MRPS14O60783 128 aaKnown RBP10.96□□□□□ -0.65
SS18-222ENST00000582792 TTRP02766 147 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 CDK1P06493 297 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 HTR1AP08908 422 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 ZNF19P17023 458 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 CCL1P22362 96 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 GPM6AP51674 278 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 GBX2P52951 348 aaPredicted RBP10.96□□□□□ -0.65
SS18-222ENST00000582792 LGALS4P56470 323 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 SLC35A2P78381 396 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 MFGE8Q08431 387 aaPredicted RBP10.96□□□□□ -0.65
SS18-222ENST00000582792 CCDC58Q4VC31 144 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 OR2G2Q8NGZ5 317 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 PELI1Q96FA3 418 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 CNBD2Q96M20 576 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 HIST1H2AAQ96QV6 131 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 CDCA4Q9BXL8 241 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 WNT10AQ9GZT5 417 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 OR51I2Q9H344 312 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 TCF19Q9Y242 345 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 PCDHGB5Q9Y5G0 923 aa10.96□□□□□ -0.65
SS18-222ENST00000582792 A0A1W2PPH5 198 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 FAM90A8PA6NJQ4 464 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 MTRF1O75570 445 aaKnown RBP10.95□□□□□ -0.66
SS18-222ENST00000582792 RPP14O95059 124 aaKnown RBP10.95□□□□□ -0.66
SS18-222ENST00000582792 ISG15P05161 165 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 UBCP0CG48 685 aaKnown RBP10.95□□□□□ -0.66
SS18-222ENST00000582792 COX7A1P24310 79 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 CRHBPP24387 322 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 MAP2K3P46734 347 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 ETV1P50549 477 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 CAPZA1P52907 286 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 RPL31P62899 125 aaKnown RBP10.95□□□□□ -0.66
SS18-222ENST00000582792 GNG3P63215 75 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 ALKBH1Q13686 389 aaKnown RBP10.95□□□□□ -0.66
SS18-222ENST00000582792 TMEM244Q5VVB8 128 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 TMEM200BQ69YZ2 307 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 CCBE1Q6UXH8 406 aaPredicted RBP10.95□□□□□ -0.66
SS18-222ENST00000582792 AHSA2Q719I0 299 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 LHFPL4Q7Z7J7 247 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 ZNF485Q8NCK3 441 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 ZNF671Q8TAW3 534 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 OR51E1Q8TCB6 317 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 RPS4Y2Q8TD47 263 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 C10orf35Q96D05 121 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 GPR84Q9NQS5 396 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 BABAM2Q9NXR7 383 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 SLC22A13Q9Y226 551 aa10.95□□□□□ -0.66
SS18-222ENST00000582792 A0A1B0GTI1 187 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 hCG_1809904A0A1W2PP81 198 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 A0A1W2PPE2 198 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 A0A1W2PR64 198 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 A0A1W2PRV1 198 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 A6NDX4 124 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 ZNF732B4DXR9 585 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms