RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CALCRP30988 508 aa24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 GZMKP49863 264 aa24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 NAAAQ02083 359 aa24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 MPV17LQ2QL34 196 aa24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 MBNL2Q5VZF2 373 aaKnown RBP24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 TERB2Q8NHR7 220 aa24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF486Q96H40 463 aaPredicted RBP24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 CMSS1Q9BQ75 279 aaKnown RBP24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF69Q9UC07 566 aa24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF230Q9UIE0 474 aaPredicted RBP24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 PURGQ9UJV8 347 aaKnown RBP24.25■■□□□ 1.47
CTDNEP1-210ENST00000574322 OR2AT4A6NND4 320 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 F8VVB4 439 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 F8VWA3 439 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 ERP29P30040 261 aaKnown RBP24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 ALKBH6Q3KRA9 238 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 OVCH2Q7RTZ1 564 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 OR8G5Q8NG78 346 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 USB1Q9BQ65 265 aaKnown RBP24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 RCC2Q9P258 522 aaKnown RBP24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 VSIG4Q9Y279 399 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 UBE2QL1A1L167 161 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 TLE1Q04724 770 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 RBPJQ06330 500 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 MUCL1Q96DR8 90 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 RADILQ96JH8 1075 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 TINAGQ9UJW2 476 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF222Q9UK12 451 aa24.24■■□□□ 1.47
CTDNEP1-210ENST00000574322 A0A1B0GWJ7 208 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 OR4E1P0C645 316 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 OR3A3P47888 321 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 CDK10Q15131 360 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF718Q3SXZ3 478 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 FAHD2BQ6P2I3 314 aaPredicted RBP24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 SLC25A42Q86VD7 318 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 LHFPL1Q86WI0 220 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZBTB8BQ8NAP8 495 aaPredicted RBP24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF431Q8TF32 576 aaPredicted RBP24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 FAHD2AQ96GK7 314 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 ADAT1Q9BUB4 502 aaKnown RBP24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 ELOVL5Q9NYP7 299 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 JKAMPQ9P055 326 aa24.23■■□□□ 1.47
CTDNEP1-210ENST00000574322 TMEM210A6NLX4 147 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 OR7C1O76099 320 aaPredicted RBP24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 BMP5P22003 454 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 MRPS15P82914 257 aaKnown RBP24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 GRK1Q15835 563 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 TMEM211Q6ICI0 200 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 WDR86Q86TI4 376 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 TMEM17Q86X19 198 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 MUC20Q8N307 709 aaPredicted RBP24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 ST6GALNAC3Q8NDV1 305 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 OR52B4Q8NGK2 314 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 HDHD3Q9BSH5 251 aaPredicted RBP24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF436Q9C0F3 470 aaPredicted RBP24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 TMEM100Q9NV29 134 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZNF701Q9NV72 531 aaPredicted RBP24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 CFAP46Q8IYW2 2715 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 ZGRF1Q86YA3 2104 aa24.22■■□□□ 1.47
CTDNEP1-210ENST00000574322 FCGR3AP08637 254 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 ACAA1P09110 424 aaPredicted RBP24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 IL13RA2Q14627 380 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 CHRFAM7AQ494W8 412 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 HS3ST6Q96QI5 342 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 FABP7O15540 132 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 CAPSLQ8WWF8 208 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 PPA2Q9H2U2 334 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 IFT22Q9H7X7 185 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 ANXA10Q9UJ72 324 aa24.21■■□□□ 1.47
CTDNEP1-210ENST00000574322 IGKV1D-8A0A087WSZ0 117 aa24.2■■□□□ 1.46
CTDNEP1-210ENST00000574322 C4orf46Q504U0 113 aa24.2■■□□□ 1.46
CTDNEP1-210ENST00000574322 Q8IYB0 196 aa24.2■■□□□ 1.46
CTDNEP1-210ENST00000574322 OSGIN2Q9Y236 505 aa24.2■■□□□ 1.46
CTDNEP1-210ENST00000574322 POLDIP2Q9Y2S7 368 aa24.2■■□□□ 1.46
CTDNEP1-210ENST00000574322 PRR14LQ5THK1 2151 aa24.2■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZNF83P51522 516 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 ERVK11-1P61568 191 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 FAM27E3Q08E93 113 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 OR8G1Q15617 311 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 TMED4Q7Z7H5 227 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 PEG10Q86TG7 708 aaKnown RBP24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 FAM58AQ8N1B3 248 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 SCCPDHQ8NBX0 429 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 MAFIPQ8WZ33 124 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 HYLS1Q96M11 299 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 SCGB3A2Q96PL1 93 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 FN3KRPQ9HA64 309 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 SPACA1Q9HBV2 294 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 C12orf4Q9NQ89 552 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 DLL4Q9NR61 685 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 ESPL1Q14674 2120 aa24.19■■□□□ 1.46
CTDNEP1-210ENST00000574322 EEF1E1-BLOC1S5C9J1V9 151 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 OR2A4O95047 310 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 GLAP06280 429 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 GCH1P30793 250 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 TSPAN5P62079 268 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 SRSF7Q16629 238 aaKnown RBP eCLIP24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 SPERTQ8NA61 448 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 OR13G1Q8NGZ3 307 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 OR2A7Q96R45 310 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms