RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 WHAMMP3Q1A5X7 153 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ZNF404Q494X3 552 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 SLC36A2Q495M3 483 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 LRRC23Q53EV4 343 aaPredicted RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 C1orf140Q5VVS0 124 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ARL9Q6T311 187 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ZNF836Q6ZNA1 936 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ZNF600Q6ZNG1 722 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 LRRC74BQ6ZQY2 392 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 NET1Q7Z628 596 aaPredicted RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 NR2C2APQ86WQ0 139 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 HOGA1Q86XE5 327 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 TMEM123Q8N131 208 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 Q8N2B8 174 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 CADM2Q8N3J6 435 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 OR5T2Q8NGG2 359 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ZNF671Q8TAW3 534 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 SLC7A13Q8TCU3 470 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 GPR148Q8TDV2 347 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 GEMIN6Q8WXD5 167 aaKnown RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 LHX4Q969G2 390 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ISOC1Q96CN7 298 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 SLC25A36Q96CQ1 311 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ZNF486Q96H40 463 aaPredicted RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 C7orf34Q96L11 122 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 TRNT1Q96Q11 434 aaKnown RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 S1PR3Q99500 378 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 ARHGDIGQ99819 225 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 SSX3Q99909 188 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 SLC35A5Q9BS91 424 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 SIRPDQ9H106 197 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 RIBC2Q9H4K1 309 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 MTHFD2LQ9H903 347 aaPredicted RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 ERVK-18Q9QC07 812 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 MARCOQ9UEW3 520 aaPredicted RBP4.38□□□□□ -1.71
TCF4-220ENST00000563824 ATPIF1Q9UII2 106 aa4.38□□□□□ -1.71
TCF4-220ENST00000563824 hCG_38984A0A1B0GV85 526 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 M0R3G1 203 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 AIM2O14862 343 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 AHSA1O95433 338 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 DIRAS3O95661 229 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ANXA8P13928 327 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ZNF26P17031 533 aaPredicted RBP4.37□□□□□ -1.71
TCF4-220ENST00000563824 C4BPBP20851 252 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 PTBP1P26599 531 aaKnown RBP eCLIP4.37□□□□□ -1.712e-7■■■■□ 24.3
TCF4-220ENST00000563824 SLC6A1P30531 599 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 CHI3L1P36222 383 aaPredicted RBP4.37□□□□□ -1.71
TCF4-220ENST00000563824 CDKN2CP42773 168 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 VEGFCP49767 419 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ARHGDIAP52565 204 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 PRRX1P54821 245 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 COPZ1P61923 177 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 HPCAP84074 193 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 IL24Q13007 206 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 SPANXN4Q5MJ08 99 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ANXA8L1Q5VT79 327 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 CARD17Q5XLA6 110 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ZNF101Q8IZC7 436 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 LYG1Q8N1E2 194 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 SLC22A24Q8N4F4 322 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 OR13C2Q8NGS9 318 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 OR52P1PQ8NH57 321 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 PNPT1Q8TCS8 783 aaKnown RBP4.37□□□□□ -1.71
TCF4-220ENST00000563824 KLF14Q8TD94 323 aaPredicted RBP4.37□□□□□ -1.71
TCF4-220ENST00000563824 TESCQ96BS2 214 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 TEX37Q96LM6 180 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 COQ7Q99807 217 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ASCL2Q99929 193 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 TMEM246Q9BRR3 403 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 EMC6Q9BV81 110 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ULBP2Q9BZM5 246 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 DPY30Q9C005 99 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 TMEM231Q9H6L2 316 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 ELOVL3Q9HB03 270 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 TSSC4Q9Y5U2 329 aaPredicted RBP4.37□□□□□ -1.71
TCF4-220ENST00000563824 DNAH7Q8WXX0 4024 aa4.37□□□□□ -1.71
TCF4-220ENST00000563824 A0A087WW49 117 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 ZNF726A6NNF4 738 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 SIGLEC5O15389 551 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 TIMM8AO60220 97 aaPredicted RBP4.36□□□□□ -1.71
TCF4-220ENST00000563824 SPAG7O75391 227 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 PTBP3O95758 552 aaKnown RBP4.36□□□□□ -1.71
TCF4-220ENST00000563824 HPRP00739 348 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 OPN1SWP03999 348 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 DBIP07108 87 aaKnown RBP4.36□□□□□ -1.71
TCF4-220ENST00000563824 PATE4P0C8F1 98 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 THRBP10828 461 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 CCL2P13500 99 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 NCF2P19878 526 aaPredicted RBP4.36□□□□□ -1.71
TCF4-220ENST00000563824 GSTM3P21266 225 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 IL12AP29459 219 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 MDH1P40925 334 aaKnown RBP4.36□□□□□ -1.71
TCF4-220ENST00000563824 SRP9P49458 86 aaKnown RBP4.36□□□□□ -1.71
TCF4-220ENST00000563824 RGS6P49758 472 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 ARPC4P59998 168 aa4.36□□□□□ -1.71
TCF4-220ENST00000563824 ERVS71-1P61550 626 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms