RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TXNIPQ9H3M7 391 aa5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 GPR84Q9NQS5 396 aa5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 MRPL22Q9NWU5 206 aaKnown RBP5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 PILRAQ9UKJ1 303 aa5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 MMP24Q9Y5R2 645 aa5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 HS3ST3B1Q9Y662 390 aa5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 COL5A1P20908 1838 aaPredicted RBP5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM131Q92545 1883 aa5.2□□□□□ -1.58
SNRPA1-209ENST00000560307 LTBP2Q14767 1821 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TGIF2-C20orf24A0A0A6YYL0 155 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 PIGBOS1A0A0B4J2F0 54 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 A0A1B0GU03 582 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 DUXBA0A1W2PPF3 345 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 FOXI3A8MTJ6 420 aaPredicted RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 B5MCH6 92 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TOX3O15405 576 aaPredicted RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CDC14BO60729 498 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 RAMP1O60894 148 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 PIAS2O75928 621 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 HLA-DQA2P01906 255 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 AMBPP02760 352 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CXCL10P02778 98 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 STATHP02808 62 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 PCCBP05166 539 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF823P16415 610 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 DUSP1P28562 367 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 P2RY2P41231 377 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TNFSF10P50591 281 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 LBX1P52954 281 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CASP6P55212 293 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 RND3P61587 244 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 RANP62826 216 aaKnown RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CSNK2A1P68400 391 aaPredicted RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 SRPXP78539 464 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 HSF1Q00613 529 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TLE4Q04727 773 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 BAXQ07812 192 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 FAM53BQ14153 422 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 ODF4Q2M2E3 257 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 ACOT6Q3I5F7 207 aaPredicted RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 GXYLT1Q4G148 440 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 DEFB134Q4QY38 66 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 THEM4Q5T1C6 240 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 C1orf194Q5T5A4 169 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 FBXO42Q6P3S6 717 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CBLN3Q6UW01 205 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 LANCL3Q6ZV70 420 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF573Q86YE8 665 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 OR4N5Q8IXE1 308 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM156Q8N614 296 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CSNK2A3Q8NEV1 391 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 OR10A7Q8NGE5 316 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 OR13C9Q8NGT0 318 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 OR14L1PQ8NHC6 308 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 FAM213BQ8TBF2 198 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 ZCCHC10Q8TBK6 192 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 RNF133Q8WVZ7 376 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 DNASE2BQ8WZ79 361 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 FGF14Q92915 247 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TAAR8Q969N4 342 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM18Q96B42 140 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CMBLQ96DG6 245 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 C1orf147Q96MC9 270 aaPredicted RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 OR2M4Q96R27 311 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 IMMP2LQ96T52 175 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 NRTNQ99748 197 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 SPIN2AQ99865 258 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 SPIN2BQ9BPZ2 258 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 AGMATQ9BSE5 352 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TM2D1Q9BX74 207 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TMEM59Q9BXS4 323 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 C11orf1Q9H5F2 150 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 CISD1Q9NZ45 108 aaKnown RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 GSKIPQ9P0R6 139 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 OR14J1Q9UGF5 321 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 SLC17A4Q9Y2C5 497 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 MRPS28Q9Y2Q9 187 aaKnown RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 GOLT1BQ9Y3E0 138 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 PTRH2Q9Y3E5 179 aaKnown RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 LSM5Q9Y4Y9 91 aaKnown RBP5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 WSB1Q9Y6I7 421 aa5.19□□□□□ -1.58
SNRPA1-209ENST00000560307 TRPM6Q9BX84 2022 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 A0A0A6YYD4 124 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 A0A1W2PQD3 144 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 HIDE1A8MVS5 230 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 E9PLN8 166 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 TP53I11O14683 189 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ST8SIA3O43173 380 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 HOXA3O43365 443 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CYTIPO60759 359 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CDS2O95674 445 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 H2BFMP0C1H6 154 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF43P17038 809 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 SERPINA2P20848 420 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CCL1P22362 96 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 ZNF93P35789 620 aaPredicted RBP5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 CD200P41217 278 aa5.18□□□□□ -1.58
SNRPA1-209ENST00000560307 GABRA4P48169 554 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms