RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF556Q9HAH1 456 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 RBFOX1Q9NWB1 397 aaKnown RBP11.24□□□□□ -0.61
SLIRP-210ENST00000557431 SESN1Q9Y6P5 492 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 TCRBV3S1A0A5B6 114 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 SIRPB1O00241 398 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF254O75437 659 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 APOL3O95236 402 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 HAND1O96004 215 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 BCL3P20749 454 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 GABRR1P24046 479 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 MINOS1Q5TGZ0 78 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 TRAPPC6BQ86SZ2 158 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 SPATA24Q86W54 205 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 ASB17Q8WXJ9 295 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 CLEC7AQ9BXN2 247 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 ADGRL4Q9HBW9 690 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 ING3Q9NXR8 418 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-210ENST00000557431 MINOS1-NBL1R4GNA1 71 aa11.23□□□□□ -0.61
SLIRP-210ENST00000557431 hADV38S2A0JD32 116 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 MITFO75030 526 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-210ENST00000557431 RBP4P02753 201 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 AMY1AP04745 511 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 AMY2AP04746 511 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 ALDOBP05062 364 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 HTR1DP28221 377 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 EPHA2P29317 976 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 POU3F4P49335 361 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 CRISP1P54107 249 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF91Q05481 1191 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 CD69Q07108 199 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 ETV3LQ6ZN32 361 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 TCEANCQ8N8B7 351 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF649Q9BS31 505 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 MOB1AQ9H8S9 216 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF286AQ9HBT8 521 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 SNX5Q9Y5X3 404 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 LINC00312Q9Y6C7 94 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 TMEM14AQ9Y6G1 99 aa11.22□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF670-ZNF695F2Z2N8 137 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 ANXA8P13928 327 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 PRKACAP17612 351 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 PEX2P28328 305 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 OR3A1P47881 315 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 DAPP51397 102 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 MEF2CQ06413 473 aaPredicted RBP11.21□□□□□ -0.61
SLIRP-210ENST00000557431 PTGES3Q15185 160 aaKnown RBP11.21□□□□□ -0.61
SLIRP-210ENST00000557431 MEPCEQ7L2J0 689 aaKnown RBP11.21□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF329Q86UD4 541 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 YIPF7Q8N8F6 280 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 LINC00482Q8N8I6 264 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 OR4X2Q8NGF9 303 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 STMN2Q93045 179 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 RFT1Q96AA3 541 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.61
SLIRP-210ENST00000557431 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.21□□□□□ -0.61
SLIRP-210ENST00000557431 SLC7A11Q9UPY5 501 aa11.21□□□□□ -0.61
SLIRP-210ENST00000557431 SYT7O43581 403 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 FKBP6O75344 327 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 CCL1P22362 96 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 AZGP1P25311 298 aaKnown RBP11.2□□□□□ -0.62
SLIRP-210ENST00000557431 Q6ZSR3 168 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 CATSPERDQ86XM0 798 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 MRPL41Q8IXM3 137 aaKnown RBP11.2□□□□□ -0.62
SLIRP-210ENST00000557431 RDH10Q8IZV5 341 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 ABHD12Q8N2K0 398 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 BORCS8Q96FH0 119 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 DUX3Q96PT4 197 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 IL4I1Q96RQ9 567 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 LIN7BQ9HAP6 207 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
SLIRP-210ENST00000557431 DPM3Q9P2X0 92 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 DNAJB9Q9UBS3 223 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
SLIRP-210ENST00000557431 ENTPD6O75354 484 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 IGHV3-7P01780 117 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 CDK2P24941 298 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 GLIPR1P48060 266 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 FUT6P51993 359 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 AESQ08117 197 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 RBM39Q14498 530 aaKnown RBP11.19□□□□□ -0.62
SLIRP-210ENST00000557431 SLX4IPQ5VYV7 408 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 PRSS35Q8N3Z0 413 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 CAPSLQ8WWF8 208 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 NOL4LQ96MY1 436 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-210ENST00000557431 RBM14Q96PK6 669 aaKnown RBP11.19□□□□□ -0.62
SLIRP-210ENST00000557431 SPACA5Q96QH8 159 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 TEX12Q9BXU0 123 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 CHST5Q9GZS9 411 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 CLN6Q9NWW5 311 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
SLIRP-210ENST00000557431 IGKV1-9A0A0C4DH69 117 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 LOC107986453A0A1B0GWG9 222 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 OR2F2O95006 317 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms