RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ALKBH1Q13686 389 aaKnown RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 CDK5R1Q15078 307 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 SSX1Q16384 188 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 SMIM21Q3B7S5 101 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 CCDC58Q4VC31 144 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 FDX2Q6P4F2 183 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 METAP1DQ6UB28 335 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 Q6YL49 198 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF573Q86YE8 665 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF485Q8NCK3 441 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ZNRF1Q8ND25 227 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 OR5AK2Q8NH90 309 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF671Q8TAW3 534 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 TRMT10AQ8TBZ6 339 aaKnown RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 RAB2BQ8WUD1 216 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 H1FXQ92522 213 aaKnown RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 SLC25A28Q96A46 364 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ISOC1Q96CN7 298 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 MED30Q96HR3 178 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 OR51E2Q9H255 320 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 SIRT7Q9NRC8 400 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 NDUFB11Q9NX14 153 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 RASL12Q9NYN1 266 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 STUB1Q9UNE7 303 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 CEPT1Q9Y6K0 416 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 A0A0U1RQK1 487 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 RNASEK-C17orf49H0YIS7 233 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 SYT7O43581 403 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 GABRA5P31644 462 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 GABRA2P47869 451 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 TMBIM6P55061 237 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 IL24Q13007 206 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 KLRD1Q13241 179 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 TPBGQ13641 420 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 TRAM1Q15629 374 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 ANGPTL5Q86XS5 388 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 LDLRAD3Q86YD5 345 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 ANKRD13BQ86YJ7 626 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 RDH10Q8IZV5 341 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 BATF2Q8N1L9 274 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 TMEM185AQ8NFB2 350 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 OR2G2Q8NGZ5 317 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 OR10AC1Q8NH08 325 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 NPRL2Q8WTW4 380 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 TSEN15Q8WW01 171 aaKnown RBP8.47□□□□□ -1.05
SHMT2-224ENST00000556737 GHSRQ92847 366 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 DGCR14Q96DF8 476 aaKnown RBP8.47□□□□□ -1.05
SHMT2-224ENST00000556737 SMIM19Q96E16 107 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 ADAT3Q96EY9 351 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-224ENST00000556737 PDCD1LG2Q9BQ51 273 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 PKIBQ9C010 78 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 UNKLQ9H9P5 680 aaKnown RBP8.47□□□□□ -1.05
SHMT2-224ENST00000556737 NOX4Q9NPH5 578 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 FRRS1LQ9P0K9 344 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 POLDIP2Q9Y2S7 368 aa8.47□□□□□ -1.05
SHMT2-224ENST00000556737 SIRT4Q9Y6E7 314 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-224ENST00000556737 TRBV23-1A0A0A0MS06 115 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 IGKV1-9A0A0C4DH69 117 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 FAM230AA0A1W2PPH8 454 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 RFPL4AA6NLU0 287 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 TMEM212A6NML5 194 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 RFPL4AL1F8VTS6 287 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 F8VVB4 439 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 F8VWA3 439 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 M0R1W7 72 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 OGG1O15527 345 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 GATBO75879 557 aaKnown RBP8.46□□□□□ -1.06
SHMT2-224ENST00000556737 SERPINA3P01011 423 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 ISG15P05161 165 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 NDUFB7P17568 137 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 SERPINB10P48595 397 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 VBP1P61758 197 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 NCS1P62166 190 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 GPR50Q13585 617 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 FOXB2Q5VYV0 432 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 DMKNQ6E0U4 476 aaPredicted RBP8.46□□□□□ -1.06
SHMT2-224ENST00000556737 HCP5Q6MZN7 132 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 C16orf87Q6PH81 154 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 EGFL6Q8IUX8 553 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 PDZD9Q8IXQ8 264 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 PNKDQ8N490 385 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 MS4A15Q8N5U1 240 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 TMEM86BQ8N661 226 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 CCDC54Q8NEL0 328 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 OR51A4Q8NGJ6 313 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 OR13C5Q8NGS8 318 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 PP6455Q8WZ26 134 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 C10orf35Q96D05 121 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 CHIAQ9BZP6 476 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 C19orf12Q9NSK7 152 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 MTCH1Q9NZJ7 389 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 GSTK1Q9Y2Q3 226 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 ZNF281Q9Y2X9 895 aa8.46□□□□□ -1.06
SHMT2-224ENST00000556737 A0A1W2PQ09 198 aa8.45□□□□□ -1.06
SHMT2-224ENST00000556737 OR4C45A6NMZ5 311 aa8.45□□□□□ -1.06
SHMT2-224ENST00000556737 H3BMQ9 156 aa8.45□□□□□ -1.06
SHMT2-224ENST00000556737 GABRPO00591 440 aa8.45□□□□□ -1.06
SHMT2-224ENST00000556737 GPX5O75715 221 aa8.45□□□□□ -1.06
SHMT2-224ENST00000556737 NXPH2O95156 264 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms