RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SHANK1Q9Y566 2161 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 CEACAM18A8MTB9 384 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 J3QT63 122 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 OR4E1P0C645 316 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 KITLGP21583 273 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 OR3A3P47888 321 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 MRPS15P82914 257 aaKnown RBP12.56□□□□□ -0.4
VPS33B-205ENST00000556096 TLE1Q04724 770 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 DAZAP2Q15038 168 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-205ENST00000556096 MPV17LQ2QL34 196 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 LINC00596Q86U02 117 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 TMEM17Q86X19 198 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF431Q8TF32 576 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-205ENST00000556096 S100PBPQ96BU1 408 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF230Q9UIE0 474 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-205ENST00000556096 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
VPS33B-205ENST00000556096 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 FABP7O15540 132 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 SYNGR1O43759 233 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 MPV17P39210 176 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 RBPJQ06330 500 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 CDK10Q15131 360 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 GRK1Q15835 563 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF718Q3SXZ3 478 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 C4orf46Q504U0 113 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
VPS33B-205ENST00000556096 FAHD2BQ6P2I3 314 aaPredicted RBP12.55□□□□□ -0.4
VPS33B-205ENST00000556096 OVCH2Q7RTZ1 564 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 MRGPRGQ86SM5 289 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 OR8G5Q8NG78 346 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 OR52B4Q8NGK2 314 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 MUCL1Q96DR8 90 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 FAHD2AQ96GK7 314 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 RADILQ96JH8 1075 aa12.55□□□□□ -0.4
VPS33B-205ENST00000556096 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF436Q9C0F3 470 aaPredicted RBP12.55□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF701Q9NV72 531 aaPredicted RBP12.55□□□□□ -0.4
VPS33B-205ENST00000556096 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
VPS33B-205ENST00000556096 A0A0G2JNJ9 132 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 F8VVB4 439 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 F8VWA3 439 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 OR7C1O76099 320 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-205ENST00000556096 CALCRP30988 508 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 TSPAN5P62079 268 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 NAAAQ02083 359 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 ALKBH6Q3KRA9 238 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 CHRFAM7AQ494W8 412 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 LHFPL1Q86WI0 220 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 MUC20Q8N307 709 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-205ENST00000556096 CAPSLQ8WWF8 208 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 HYLS1Q96M11 299 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 HDHD3Q9BSH5 251 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-205ENST00000556096 ADAT1Q9BUB4 502 aaKnown RBP12.54□□□□□ -0.4
VPS33B-205ENST00000556096 PPA2Q9H2U2 334 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 RANBP3Q9H6Z4 567 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-205ENST00000556096 DLL4Q9NR61 685 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 RCC2Q9P258 522 aaKnown RBP12.54□□□□□ -0.4
VPS33B-205ENST00000556096 MGAT4CQ9UBM8 478 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 Q9UFV3 132 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 TMEM210A6NLX4 147 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 FCGR3AP08637 254 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 OR8G1Q15617 311 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 MAFIPQ8WZ33 124 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 SCGB3A2Q96PL1 93 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 POLDIP2Q9Y2S7 368 aa12.54□□□□□ -0.4
VPS33B-205ENST00000556096 RP1L1Q8IWN7 2480 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-205ENST00000556096 IGKV1D-8A0A087WSZ0 117 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 OR2A4O95047 310 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 ACAA1P09110 424 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-205ENST00000556096 BMP5P22003 454 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 GCH1P30793 250 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 PDCD1Q15116 288 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 NLRC3Q7RTR2 1065 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 Q8IYB0 196 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 FAM58AQ8N1B3 248 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 OR2A7Q96R45 310 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF442Q9H7R0 627 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 SPACA1Q9HBV2 294 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 EHFQ9NZC4 300 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF462Q96JM2 2506 aa12.52□□□□□ -0.4
VPS33B-205ENST00000556096 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.52□□□□□ -0.41
VPS33B-205ENST00000556096 A0A1B0GWJ7 208 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 SMLR1H3BR10 107 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 GLAP06280 429 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms