RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 EDDM3AQ14507 147 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ODF4Q2M2E3 257 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLC25A26Q70HW3 274 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PRSS35Q8N3Z0 413 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 UTP4Q969X6 686 aaKnown RBP11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CHST5Q9GZS9 411 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 RBFOX1Q9NWB1 397 aaKnown RBP11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 hADV38S2A0JD32 116 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ENTPD6O75354 484 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 HAND1O96004 215 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 LPLP06858 475 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 VSIG8P0DPA2 414 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CALCBP10092 127 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CBX1P83916 185 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 BDH1Q02338 343 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZNF146Q15072 292 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLX4IPQ5VYV7 408 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 NXNL2Q5VZ03 156 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 C12orf73Q69YU5 71 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 EGFL6Q8IUX8 553 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TCEANCQ8N8B7 351 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 LINC00482Q8N8I6 264 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 NDNFQ8TB73 568 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 LRGUKQ96M69 825 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 THTPAQ9BU02 230 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 LIN7BQ9HAP6 207 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PAPOLBQ9NRJ5 636 aaKnown RBP11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TSSC4Q9Y5U2 329 aaPredicted RBP11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 STAB2Q8WWQ8 2551 aa11.42□□□□□ -0.58
CHMP4BP1-201ENST00000556017 DNAH7Q8WXX0 4024 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 IGKV1-12A0A0C4DH73 117 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TCRBV4S1A1TA0A5B7 111 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZAR1LA6NP61 321 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PEX14O75381 377 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 RPP14O95059 124 aaKnown RBP11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 IGKV1D-12P01611 117 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 BCL3P20749 454 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 HTR1DP28221 377 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CD34P28906 385 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ERP29P30040 261 aaKnown RBP11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 HOXD3P31249 432 aaPredicted RBP11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 KIR3DL2P43630 455 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 FUT6P51993 359 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ISL1P61371 349 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 GRK1Q15835 563 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ABCA11PQ4W5N1 156 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PRAMEF5Q5TYX0 476 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 C16orf82Q7Z2V1 217 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TMEM163Q8TC26 289 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 NRBF2Q96F24 287 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 RCC1LQ96I51 464 aaKnown RBP11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 RBM14Q96PK6 669 aaKnown RBP11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 MNTQ99583 582 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZNF286AQ9HBT8 521 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 DPM3Q9P2X0 92 aa11.41□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TRBV2A0A0J9YWF9 115 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 A0A1W2PQL4 384 aaPredicted RBP11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 FAM172BPA6NC97 362 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZNF670-ZNF695F2Z2N8 137 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 OR2F2O95006 317 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ALDOBP05062 364 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PF4V1P10720 104 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PEX2P28328 305 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 P2RX3P56373 397 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLC35A2P78381 396 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 C18orf65Q6ZTR6 163 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CENPVQ7Z7K6 275 aaPredicted RBP11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 RDH10Q8IZV5 341 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 FAM58AQ8N1B3 248 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ABHD12Q8N2K0 398 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 DNAJC9Q8WXX5 260 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CORO2AQ92828 525 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 EMG1Q92979 244 aaKnown RBP11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ADAT3Q96EY9 351 aaPredicted RBP11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 IL4I1Q96RQ9 567 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TBX5Q99593 518 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLC7A11Q9UPY5 501 aa11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 UBE2J1Q9Y385 318 aaPredicted RBP11.4□□□□□ -0.58
CHMP4BP1-201ENST00000556017 MGST3O14880 152 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 SYT7O43581 403 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 DNAJC8O75937 253 aaPredicted RBP11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 APOL3O95236 402 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GABRR1P24046 479 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 GLIPR1P48060 266 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 KDM4DQ6B0I6 523 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 MRPL41Q8IXM3 137 aaKnown RBP11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 YIPF7Q8N8F6 280 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 HMG20AQ9NP66 347 aa11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHMP4BP1-201ENST00000556017 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A18PA6NE21 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A16PA6NEW6 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 FAM90A20PA6NIJ5 464 aa11.38□□□□□ -0.59
CHMP4BP1-201ENST00000556017 METTL15A6NJ78 407 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms