RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 HLA-DQA1P01909 254 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 CELP19835 753 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 MAGP20916 626 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 RCVRNP35243 200 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 CLDN12P56749 244 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 SYCNQ0VAF6 134 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 CLEC12BQ2HXU8 276 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF404Q494X3 552 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 COX19Q49B96 90 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 RNASE13Q5GAN3 156 aaKnown RBP3.85□□□□□ -1.79
SCFD1-208ENST00000553278 AP1ARQ63HQ0 302 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 DNM1P34Q6PK57 102 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 NTM-AS1Q6ZSK4 140 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 C2orf73Q8N5S3 287 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-208ENST00000553278 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 TTLQ8NG68 377 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 OR5M1Q8NGP8 315 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 RNF138Q8WVD3 245 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 CCL17Q92583 94 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 SMIM12Q96EX1 92 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 OR2A7Q96R45 310 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF649Q9BS31 505 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 TSGA10Q9BZW7 698 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 METTL9Q9H1A3 318 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 WFDC1Q9HC57 220 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 FBXO6Q9NRD1 293 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-208ENST00000553278 FGFR1OP2Q9NVK5 253 aa3.85□□□□□ -1.79
SCFD1-208ENST00000553278 VWA8A3KMH1 1905 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 A0A096LNJ9 63 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 DAPL1A0PJW8 107 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 PINLYPA6NC86 204 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 M0QZ92 97 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SSNA1O43805 119 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 PDCD6O75340 191 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 FOXH1O75593 365 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SOX14O95416 240 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 CTDNEP1O95476 244 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SNRPAP09012 282 aaKnown RBP3.84□□□□□ -1.79
SCFD1-208ENST00000553278 CECR9P0C854 216 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 PSG2P11465 335 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SPNP16150 400 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF823P16415 610 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 UGT2B7P16662 529 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ME2P23368 584 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 PRTN3P24158 256 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 GRPRP30550 384 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 RAB25P57735 213 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 FAM3AP98173 230 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 GOLGA7BQ2TAP0 167 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 UBE2NLQ5JXB2 153 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 CLLU1OSQ5K130 101 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 FAM162BQ5T6X4 162 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 OGFRL1Q5TC84 451 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-208ENST00000553278 TSPO2Q5TGU0 170 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SAXO2Q658L1 398 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ENTHD1Q8IYW4 607 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 OR52E4Q8NGH9 312 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 OR6K3Q8NGY3 331 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 STOML3Q8TAV4 291 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 SMIM19Q96E16 107 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ARL6Q9H0F7 186 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 POMKQ9H5K3 350 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ASB7Q9H672 318 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 LRRC19Q9H756 370 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ASB8Q9H765 288 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 METTL17Q9H7H0 456 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF331Q9NQX6 463 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-208ENST00000553278 HMGXB4Q9UGU5 601 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 ENOPH1Q9UHY7 261 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 TP53TG3Q9ULZ0 132 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 NEU3Q9UQ49 428 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 KLF13Q9Y2Y9 288 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-208ENST00000553278 RAB3GAP2Q9H2M9 1393 aa3.84□□□□□ -1.79
SCFD1-208ENST00000553278 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-208ENST00000553278 TMEM72A0PK05 275 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 FAM183AA6NL82 134 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 CD300LBA8K4G0 201 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 F5H768 121 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 H0Y980 276 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 H3BP45 60 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 BIRC5O15392 142 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 SLC37A4O43826 429 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 M6PRP20645 277 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 CBX5P45973 191 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 HAAOP46952 286 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 TEX30Q5JUR7 227 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 TTC33Q6PID6 262 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-208ENST00000553278 GALNT10Q86SR1 603 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 MKXQ8IYA7 352 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 OR4P4Q8NGL7 312 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 CASTOR1Q8WTX7 329 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 PPP1R14BQ96C90 147 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 KCTD7Q96MP8 289 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 TBL1YQ9BQ87 522 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 NDFIP1Q9BT67 221 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 PARD6GQ9BYG4 376 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-208ENST00000553278 DMAC2Q9NW81 257 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 WSB1Q9Y6I7 421 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 LRP4O75096 1905 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms