RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	ASCC1	Q8N9N2	400 aa	Known RBP	4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260		Q8N9W7	124 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	OR2AJ1	Q8NGZ0	328 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	TSEN15	Q8WW01	171 aa	Known RBP	4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	SPSB4	Q96A44	273 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	SGK3	Q96BR1	496 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	BPIFA2	Q96DR5	249 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ZIM3	Q96PE6	472 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ZBTB18	Q99592	522 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	NEURL2	Q9BR09	285 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	CHCHD6	Q9BRQ6	235 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	GON7	Q9BXV9	100 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	TOLLIP	Q9H0E2	274 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ABCG5	Q9H222	651 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	FBXL17	Q9UF56	701 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	LGALS13	Q9UHV8	139 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	MED31	Q9Y3C7	131 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	WSB1	Q9Y6I7	421 aa		4.42	□□□□□ -1.7
RACGAP1-223	ENST00000551260	MSGN1	A6NI15	193 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	TMEM210	A6NLX4	147 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ANXA2P2	A6NMY6	339 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	NCBP2L	A6PVI3	153 aa	Known RBP	4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260		K7N7A8	449 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260		M0QX08	132 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	BIRC5	O15392	142 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	IGHV3-11	P01762	117 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	TROVE2	P10155	538 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	KRT4	P19013	534 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ACKR3	P25106	362 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	OTX1	P32242	354 aa	Predicted RBP	4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	DDOST	P39656	456 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	CDKN2A	P42771	156 aa	Known RBP	4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	SLC7A2	P52569	658 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	LINC00205	P59089	165 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	TAS2R41	P59536	307 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	PIN1	Q13526	163 aa	Predicted RBP	4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	HLA-DRB5	Q30154	266 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	IGFL4	Q6B9Z1	124 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	DRAM2	Q6UX65	266 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	IL34	Q6ZMJ4	242 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ZBTB49	Q6ZSB9	765 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	PGAM4	Q8N0Y7	254 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ZNF596	Q8TC21	504 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	PIGC	Q92535	297 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	SPTSSA	Q969W0	71 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	REEP6	Q96HR9	211 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ELOVL1	Q9BW60	279 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	DGCR6L	Q9BY27	220 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	C20orf27	Q9GZN8	174 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	OR51I2	Q9H344	312 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	FN3K	Q9H479	309 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	GPR173	Q9NS66	373 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	ZNF319	Q9P2F9	582 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	CYB5R1	Q9UHQ9	305 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	RIMS3	Q9UJD0	308 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	DNAH5	Q8TE73	4624 aa		4.41	□□□□□ -1.7
RACGAP1-223	ENST00000551260	IGHV3-72	A0A0B4J1Y9	119 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	KRTAP23-1	A1A580	65 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	FAM183A	A6NL82	134 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OR11H12	B2RN74	326 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ZNF732	B4DXR9	585 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IGLL5	B9A064	214 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260		H0Y980	276 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CDC42EP2	O14613	210 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	XRCC2	O43543	280 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RRP9	O43818	475 aa	Known RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	AHCYL1	O43865	530 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	ZNF737	O75373	536 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TPPP	O94811	219 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IGHV3-7	P01780	117 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	IL6	P05231	212 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CD14	P08571	375 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	PPIF	P30405	207 aa	Known RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CEACAM3	P40198	252 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	RAB9A	P51151	201 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	EIF2B1	Q14232	305 aa	Known RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TIGD6	Q17RP2	521 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	SMIM21	Q3B7S5	101 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CEP78	Q5JTW2	689 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CCDC144NL	Q6NUI1	221 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	HAGHL	Q6PII5	290 aa	Predicted RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CCDC80	Q76M96	950 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	GDPD3	Q7L5L3	318 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OAF	Q86UD1	273 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TGIF2LX	Q8IUE1	241 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OR52L1	Q8NGH7	329 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OR9I1	Q8NGQ6	314 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	AQP3	Q92482	292 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	GTF2H4	Q92759	462 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TOMM40L	Q969M1	308 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TAMM41	Q96BW9	452 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	MNT	Q99583	582 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	NRIP2	Q9BQI9	281 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	CHST6	Q9GZX3	395 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	NSRP1	Q9H0G5	558 aa	Known RBP	4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	TMEM38A	Q9H6F2	299 aa		4.4	□□□□□ -1.71
RACGAP1-223	ENST00000551260	OPA3	Q9H6K4	179 aa		4.4	□□□□□ -1.71

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